Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.37■□□□□ 0.21
CTC1Q2NKJ3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 AL133267.1-201ENST00000398220 340 ntBASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 MAGEA5-201ENST00000446757 942 ntBASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 AC245884.6-201ENST00000515672 1067 ntBASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 RN7SL48P-201ENST00000579283 293 ntBASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 CU633904.3-201ENST00000624042 1029 ntBASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CTC1Q2NKJ3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 AC134407.2-201ENST00000625089 1978 ntBASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 AL138799.1-201ENST00000448213 1675 ntBASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 AL023775.1-201ENST00000454907 1746 ntBASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 AC092978.1-202ENST00000637590 1327 ntBASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTC1Q2NKJ3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTC1Q2NKJ3 AC023157.3-201ENST00000619086 2088 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms