Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CCL18P55774 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
CCL18P55774 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CCL18P55774 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CCL18P55774 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CCL18P55774 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CCL18P55774 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CCL18P55774 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.9□□□□□ -0.67
CCL18P55774 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
CCL18P55774 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC10.9□□□□□ -0.67
CCL18P55774 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
CCL18P55774 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
CCL18P55774 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.9□□□□□ -0.67
CCL18P55774 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
CCL18P55774 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.89□□□□□ -0.67
CCL18P55774 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CCL18P55774 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CCL18P55774 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 WBP2-203ENST00000433525 928 ntTSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 AC244107.1-201ENST00000442033 332 ntBASIC10.89□□□□□ -0.67
CCL18P55774 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC10.89□□□□□ -0.67
CCL18P55774 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC10.89□□□□□ -0.67
CCL18P55774 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.89□□□□□ -0.67
CCL18P55774 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC10.89□□□□□ -0.67
CCL18P55774 LINC01115-203ENST00000606068 577 ntBASIC10.89□□□□□ -0.67
CCL18P55774 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 SSR4P1-203ENST00000599569 2260 ntBASIC10.89□□□□□ -0.67
CCL18P55774 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.89□□□□□ -0.67
CCL18P55774 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC10.89□□□□□ -0.67
CCL18P55774 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CCL18P55774 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms