Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.81□□□□□ -0.36
EFNA4P52798 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EFNA4P52798 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNA4P52798 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNA4P52798 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
EFNA4P52798 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EFNA4P52798 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.8□□□□□ -0.36
EFNA4P52798 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.8□□□□□ -0.36
EFNA4P52798 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 PKD1P5-201ENST00000532415 10291 ntBASIC12.8□□□□□ -0.36
EFNA4P52798 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
EFNA4P52798 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNA4P52798 AC138028.6-201ENST00000616106 1482 ntBASIC12.8□□□□□ -0.36
EFNA4P52798 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
EFNA4P52798 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNA4P52798 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 AL513523.2-202ENST00000427283 2040 ntBASIC12.8□□□□□ -0.36
EFNA4P52798 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 AC055811.4-201ENST00000624039 1754 ntBASIC12.8□□□□□ -0.36
EFNA4P52798 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.8□□□□□ -0.36
EFNA4P52798 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNA4P52798 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.8□□□□□ -0.36
EFNA4P52798 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 HSPB1P2-201ENST00000448722 546 ntBASIC12.8□□□□□ -0.36
EFNA4P52798 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.8□□□□□ -0.36
EFNA4P52798 AKR7A2P1-201ENST00000460134 915 ntBASIC12.8□□□□□ -0.36
EFNA4P52798 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.8□□□□□ -0.36
EFNA4P52798 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNA4P52798 FTLP10-202ENST00000505798 471 ntBASIC12.8□□□□□ -0.36
EFNA4P52798 SCARNA20.5-201ENST00000516991 142 ntBASIC12.8□□□□□ -0.36
EFNA4P52798 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNA4P52798 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.8□□□□□ -0.36
EFNA4P52798 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.8□□□□□ -0.36
EFNA4P52798 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNA4P52798 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.8□□□□□ -0.36
EFNA4P52798 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
EFNA4P52798 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.8□□□□□ -0.36
EFNA4P52798 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
EFNA4P52798 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.8□□□□□ -0.36
EFNA4P52798 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
EFNA4P52798 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EFNA4P52798 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNA4P52798 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNA4P52798 LINC02199-201ENST00000506655 2702 ntBASIC12.79□□□□□ -0.36
EFNA4P52798 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNA4P52798 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNA4P52798 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.79□□□□□ -0.36
EFNA4P52798 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
EFNA4P52798 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.79□□□□□ -0.36
EFNA4P52798 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
EFNA4P52798 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.79□□□□□ -0.36
EFNA4P52798 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
EFNA4P52798 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.79□□□□□ -0.36
EFNA4P52798 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNA4P52798 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.79□□□□□ -0.36
EFNA4P52798 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.79□□□□□ -0.36
EFNA4P52798 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.79□□□□□ -0.36
EFNA4P52798 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNA4P52798 AC126915.1-201ENST00000522847 1038 ntBASIC12.79□□□□□ -0.36
EFNA4P52798 AC084346.2-201ENST00000607097 949 ntBASIC12.79□□□□□ -0.36
EFNA4P52798 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.79□□□□□ -0.36
EFNA4P52798 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.79□□□□□ -0.36
EFNA4P52798 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC12.79□□□□□ -0.36
EFNA4P52798 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
EFNA4P52798 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
EFNA4P52798 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms