Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC009090.5-201ENST00000624886 2285 ntBASIC14.46□□□□□ -0.09
SMSP52788 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.46□□□□□ -0.09
SMSP52788 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
SMSP52788 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.46□□□□□ -0.09
SMSP52788 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 AGAP7P-201ENST00000582299 2062 ntBASIC14.46□□□□□ -0.09
SMSP52788 AGAP14-201ENST00000624701 2060 ntBASIC14.46□□□□□ -0.09
SMSP52788 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SMSP52788 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.46□□□□□ -0.09
SMSP52788 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.46□□□□□ -0.09
SMSP52788 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SMSP52788 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.46□□□□□ -0.09
SMSP52788 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.46□□□□□ -0.09
SMSP52788 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.46□□□□□ -0.09
SMSP52788 RPS2P32-201ENST00000439199 892 ntBASIC14.46□□□□□ -0.09
SMSP52788 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SMSP52788 AC010336.2-201ENST00000564226 506 ntBASIC14.46□□□□□ -0.09
SMSP52788 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.46□□□□□ -0.09
SMSP52788 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.46□□□□□ -0.09
SMSP52788 AC132938.2-201ENST00000579188 680 ntBASIC14.46□□□□□ -0.09
SMSP52788 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.46□□□□□ -0.09
SMSP52788 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.46□□□□□ -0.09
SMSP52788 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.46□□□□□ -0.09
SMSP52788 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.46□□□□□ -0.09
SMSP52788 AL591163.1-201ENST00000641757 987 ntBASIC14.46□□□□□ -0.09
SMSP52788 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMSP52788 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.46□□□□□ -0.09
SMSP52788 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
SMSP52788 CICP23-201ENST00000605013 2741 ntBASIC14.46□□□□□ -0.09
SMSP52788 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.46□□□□□ -0.1
SMSP52788 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMSP52788 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMSP52788 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMSP52788 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMSP52788 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.46□□□□□ -0.1
SMSP52788 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.46□□□□□ -0.1
SMSP52788 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
SMSP52788 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMSP52788 SLC7A15P-201ENST00000424028 1363 ntBASIC14.46□□□□□ -0.1
SMSP52788 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMSP52788 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
SMSP52788 AC127383.1-201ENST00000444697 1800 ntBASIC14.45□□□□□ -0.1
SMSP52788 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.45□□□□□ -0.1
SMSP52788 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.45□□□□□ -0.1
SMSP52788 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.45□□□□□ -0.1
SMSP52788 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.45□□□□□ -0.1
SMSP52788 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.45□□□□□ -0.1
SMSP52788 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SMSP52788 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.45□□□□□ -0.1
SMSP52788 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
SMSP52788 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SMSP52788 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.45□□□□□ -0.1
SMSP52788 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 AC114501.2-201ENST00000439631 535 ntBASIC14.45□□□□□ -0.1
SMSP52788 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SMSP52788 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.45□□□□□ -0.1
SMSP52788 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.45□□□□□ -0.1
SMSP52788 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.45□□□□□ -0.1
SMSP52788 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.45□□□□□ -0.1
SMSP52788 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.45□□□□□ -0.1
SMSP52788 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMSP52788 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.45□□□□□ -0.1
SMSP52788 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SMSP52788 TPRX2P-201ENST00000535362 881 ntBASIC14.45□□□□□ -0.1
SMSP52788 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.45□□□□□ -0.1
SMSP52788 AC044860.1-202ENST00000559481 777 ntBASIC14.45□□□□□ -0.1
SMSP52788 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.45□□□□□ -0.1
SMSP52788 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.45□□□□□ -0.1
SMSP52788 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 254.3 ms