Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.01■□□□□ 0.15
CLCN4P51793 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 AC245884.6-201ENST00000515672 1067 ntBASIC16.01■□□□□ 0.15
CLCN4P51793 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.01■□□□□ 0.15
CLCN4P51793 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CLCN4P51793 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCN4P51793 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.01■□□□□ 0.15
CLCN4P51793 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCN4P51793 DUX4L47-201ENST00000566374 394 ntBASIC16.01■□□□□ 0.15
CLCN4P51793 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.01■□□□□ 0.15
CLCN4P51793 AC004466.1-201ENST00000599515 1080 ntBASIC16.01■□□□□ 0.15
CLCN4P51793 CU633904.3-201ENST00000624042 1029 ntBASIC16.01■□□□□ 0.15
CLCN4P51793 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.01■□□□□ 0.15
CLCN4P51793 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCN4P51793 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.01■□□□□ 0.15
CLCN4P51793 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLCN4P51793 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCN4P51793 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.01■□□□□ 0.15
CLCN4P51793 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLCN4P51793 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CLCN4P51793 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16■□□□□ 0.15
CLCN4P51793 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16■□□□□ 0.15
CLCN4P51793 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 AC104457.1-201ENST00000401024 814 ntBASIC16■□□□□ 0.15
CLCN4P51793 AL008707.1-201ENST00000422498 534 ntBASIC16■□□□□ 0.15
CLCN4P51793 HLA-K-203ENST00000430151 1046 ntBASIC16■□□□□ 0.15
CLCN4P51793 MESTP3-201ENST00000503460 968 ntBASIC16■□□□□ 0.15
CLCN4P51793 AC005740.2-201ENST00000511085 419 ntBASIC16■□□□□ 0.15
CLCN4P51793 AC022217.1-201ENST00000521069 738 ntBASIC16■□□□□ 0.15
CLCN4P51793 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16■□□□□ 0.15
CLCN4P51793 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16■□□□□ 0.15
CLCN4P51793 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16■□□□□ 0.15
CLCN4P51793 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16■□□□□ 0.15
CLCN4P51793 AL023803.2-201ENST00000620080 638 ntBASIC16■□□□□ 0.15
CLCN4P51793 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16■□□□□ 0.15
CLCN4P51793 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CLCN4P51793 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16■□□□□ 0.15
CLCN4P51793 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16■□□□□ 0.15
CLCN4P51793 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLCN4P51793 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CLCN4P51793 KRT8P29-201ENST00000420409 1371 ntBASIC16■□□□□ 0.15
CLCN4P51793 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CLCN4P51793 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLCN4P51793 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN4P51793 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLCN4P51793 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.99■□□□□ 0.15
CLCN4P51793 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CLCN4P51793 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN4P51793 RPL5P21-201ENST00000404620 815 ntBASIC15.99■□□□□ 0.15
CLCN4P51793 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN4P51793 AL133466.1-201ENST00000447582 150 ntBASIC15.99■□□□□ 0.15
CLCN4P51793 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 AC021723.1-201ENST00000486306 515 ntBASIC15.99■□□□□ 0.15
CLCN4P51793 RN7SL720P-201ENST00000488178 304 ntBASIC15.99■□□□□ 0.15
CLCN4P51793 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN4P51793 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN4P51793 RN7SL774P-201ENST00000577467 290 ntBASIC15.99■□□□□ 0.15
CLCN4P51793 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.99■□□□□ 0.15
CLCN4P51793 AL645939.5-201ENST00000606834 243 ntBASIC15.99■□□□□ 0.15
CLCN4P51793 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.99■□□□□ 0.15
CLCN4P51793 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLCN4P51793 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CLCN4P51793 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms