Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CXCL12P48061 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.07■□□□□ 0
CXCL12P48061 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.07■□□□□ 0
CXCL12P48061 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.07■□□□□ 0
CXCL12P48061 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.07■□□□□ 0
CXCL12P48061 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.07■□□□□ 0
CXCL12P48061 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.07■□□□□ 0
CXCL12P48061 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CXCL12P48061 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CXCL12P48061 AC132192.2-201ENST00000596206 1147 ntBASIC15.07■□□□□ 0
CXCL12P48061 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CXCL12P48061 AC009884.2-201ENST00000603110 324 ntBASIC15.07■□□□□ 0
CXCL12P48061 AC008825.2-201ENST00000603374 718 ntBASIC15.07■□□□□ 0
CXCL12P48061 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CXCL12P48061 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 AL360270.3-201ENST00000609118 1348 ntBASIC15.07■□□□□ 0
CXCL12P48061 INE2-201ENST00000630399 1874 ntBASIC15.07■□□□□ 0
CXCL12P48061 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
CXCL12P48061 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
CXCL12P48061 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.07■□□□□ 0
CXCL12P48061 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.07■□□□□ 0
CXCL12P48061 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CXCL12P48061 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CXCL12P48061 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.06■□□□□ 0
CXCL12P48061 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.06■□□□□ 0
CXCL12P48061 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
CXCL12P48061 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 AC009093.2-202ENST00000620513 2079 ntBASIC15.06■□□□□ 0
CXCL12P48061 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 RPS9P1-201ENST00000419943 583 ntBASIC15.06■□□□□ 0
CXCL12P48061 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CXCL12P48061 RN7SL258P-201ENST00000478664 300 ntBASIC15.06■□□□□ 0
CXCL12P48061 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.06■□□□□ 0
CXCL12P48061 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.06■□□□□ 0
CXCL12P48061 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.06■□□□□ 0
CXCL12P48061 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.06■□□□□ 0
CXCL12P48061 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.06■□□□□ 0
CXCL12P48061 AL031713.1-201ENST00000564813 661 ntBASIC15.06■□□□□ 0
CXCL12P48061 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.06■□□□□ 0
CXCL12P48061 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.06■□□□□ 0
CXCL12P48061 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CXCL12P48061 AC138696.2-201ENST00000607376 223 ntBASIC15.06■□□□□ 0
CXCL12P48061 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.06■□□□□ 0
CXCL12P48061 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 AC074138.1-201ENST00000611182 1303 ntBASIC15.06■□□□□ 0
CXCL12P48061 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.06■□□□□ 0
CXCL12P48061 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CXCL12P48061 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CXCL12P48061 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.06■□□□□ 0
CXCL12P48061 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CXCL12P48061 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.06■□□□□ 0
CXCL12P48061 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.06■□□□□ 0
CXCL12P48061 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.06■□□□□ 0
CXCL12P48061 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CXCL12P48061 AC020916.1-201ENST00000587762 1774 ntBASIC15.06■□□□□ 0
CXCL12P48061 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CXCL12P48061 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms