Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
SSR1P43307 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.42■□□□□ 0.22
SSR1P43307 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SSR1P43307 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SSR1P43307 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SSR1P43307 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SSR1P43307 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 RPL37AP1-201ENST00000412502 279 ntBASIC16.42■□□□□ 0.22
SSR1P43307 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.42■□□□□ 0.22
SSR1P43307 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.42■□□□□ 0.22
SSR1P43307 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.42■□□□□ 0.22
SSR1P43307 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.42■□□□□ 0.22
SSR1P43307 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.42■□□□□ 0.22
SSR1P43307 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.42■□□□□ 0.22
SSR1P43307 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.42■□□□□ 0.22
SSR1P43307 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.42■□□□□ 0.22
SSR1P43307 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.42■□□□□ 0.22
SSR1P43307 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.42■□□□□ 0.22
SSR1P43307 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SSR1P43307 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SSR1P43307 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.42■□□□□ 0.22
SSR1P43307 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SSR1P43307 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.42■□□□□ 0.22
SSR1P43307 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SSR1P43307 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.42■□□□□ 0.22
SSR1P43307 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSR1P43307 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.42■□□□□ 0.22
SSR1P43307 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.42■□□□□ 0.22
SSR1P43307 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.42■□□□□ 0.22
SSR1P43307 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.41■□□□□ 0.22
SSR1P43307 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSR1P43307 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SSR1P43307 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.41■□□□□ 0.22
SSR1P43307 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SSR1P43307 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.41■□□□□ 0.22
SSR1P43307 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.41■□□□□ 0.22
SSR1P43307 CNN2P2-201ENST00000443536 909 ntBASIC16.41■□□□□ 0.22
SSR1P43307 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 CNN2P3-201ENST00000450201 906 ntBASIC16.41■□□□□ 0.22
SSR1P43307 AC125807.1-201ENST00000483097 614 ntBASIC16.41■□□□□ 0.22
SSR1P43307 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.41■□□□□ 0.22
SSR1P43307 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 AL512356.2-201ENST00000546955 174 ntBASIC16.41■□□□□ 0.22
SSR1P43307 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.41■□□□□ 0.22
SSR1P43307 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SSR1P43307 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.41■□□□□ 0.22
SSR1P43307 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.41■□□□□ 0.22
SSR1P43307 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.41■□□□□ 0.22
SSR1P43307 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 AL136317.3-201ENST00000618497 906 ntBASIC16.41■□□□□ 0.22
SSR1P43307 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.41■□□□□ 0.22
SSR1P43307 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SSR1P43307 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SSR1P43307 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSR1P43307 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SSR1P43307 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.4■□□□□ 0.22
SSR1P43307 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSR1P43307 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSR1P43307 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.4■□□□□ 0.22
SSR1P43307 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SSR1P43307 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.4■□□□□ 0.22
SSR1P43307 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SSR1P43307 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC16.4■□□□□ 0.22
SSR1P43307 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms