Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.12□□□□□ -0.15
SHC1P29353 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.12□□□□□ -0.15
SHC1P29353 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.12□□□□□ -0.15
SHC1P29353 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.12□□□□□ -0.15
SHC1P29353 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SHC1P29353 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.12□□□□□ -0.15
SHC1P29353 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.12□□□□□ -0.15
SHC1P29353 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SHC1P29353 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SHC1P29353 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
SHC1P29353 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SHC1P29353 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.12□□□□□ -0.15
SHC1P29353 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 CLK3P2-201ENST00000427566 1453 ntBASIC14.12□□□□□ -0.15
SHC1P29353 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 MYO15B-237ENST00000642007 4893 ntBASIC14.12□□□□□ -0.15
SHC1P29353 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SHC1P29353 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 AC232323.1-201ENST00000540724 2099 ntBASIC14.11□□□□□ -0.15
SHC1P29353 REXO1L5P-201ENST00000622260 2098 ntBASIC14.11□□□□□ -0.15
SHC1P29353 MIR600HG-201ENST00000449175 5984 ntBASIC14.11□□□□□ -0.15
SHC1P29353 AL121723.1-201ENST00000445194 1519 ntBASIC14.11□□□□□ -0.15
SHC1P29353 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.11□□□□□ -0.15
SHC1P29353 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SHC1P29353 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SHC1P29353 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.11□□□□□ -0.15
SHC1P29353 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.11□□□□□ -0.15
SHC1P29353 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.11□□□□□ -0.15
SHC1P29353 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SHC1P29353 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SHC1P29353 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.11□□□□□ -0.15
SHC1P29353 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 TERF1P3-201ENST00000505638 1227 ntBASIC14.11□□□□□ -0.15
SHC1P29353 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.11□□□□□ -0.15
SHC1P29353 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.11□□□□□ -0.15
SHC1P29353 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.11□□□□□ -0.15
SHC1P29353 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 AC138761.1-201ENST00000584393 385 ntBASIC14.11□□□□□ -0.15
SHC1P29353 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SHC1P29353 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SHC1P29353 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.11□□□□□ -0.15
SHC1P29353 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.11□□□□□ -0.15
SHC1P29353 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SHC1P29353 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.11□□□□□ -0.15
SHC1P29353 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.11□□□□□ -0.15
SHC1P29353 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.11□□□□□ -0.15
SHC1P29353 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 AC007541.1-201ENST00000570282 1469 ntBASIC14.11□□□□□ -0.15
SHC1P29353 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.11□□□□□ -0.15
SHC1P29353 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHC1P29353 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SHC1P29353 AL390755.1-201ENST00000623716 2027 ntBASIC14.1□□□□□ -0.15
SHC1P29353 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHC1P29353 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.1□□□□□ -0.15
SHC1P29353 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SHC1P29353 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms