Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.43■□□□□ 0.54
KCNA3P22001 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.43■□□□□ 0.54
KCNA3P22001 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC18.43■□□□□ 0.54
KCNA3P22001 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.43■□□□□ 0.54
KCNA3P22001 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.43■□□□□ 0.54
KCNA3P22001 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.43■□□□□ 0.54
KCNA3P22001 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.43■□□□□ 0.54
KCNA3P22001 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.43■□□□□ 0.54
KCNA3P22001 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
KCNA3P22001 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
KCNA3P22001 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
KCNA3P22001 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.43■□□□□ 0.54
KCNA3P22001 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.43■□□□□ 0.54
KCNA3P22001 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.43■□□□□ 0.54
KCNA3P22001 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.43■□□□□ 0.54
KCNA3P22001 AC144522.1-201ENST00000625111 1658 ntBASIC18.43■□□□□ 0.54
KCNA3P22001 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
KCNA3P22001 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KCNA3P22001 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.43■□□□□ 0.54
KCNA3P22001 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KCNA3P22001 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KCNA3P22001 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
KCNA3P22001 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KCNA3P22001 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.42■□□□□ 0.54
KCNA3P22001 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
KCNA3P22001 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
KCNA3P22001 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
KCNA3P22001 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
KCNA3P22001 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KCNA3P22001 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KCNA3P22001 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KCNA3P22001 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
KCNA3P22001 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.42■□□□□ 0.54
KCNA3P22001 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KCNA3P22001 BAK1P1-201ENST00000317045 636 ntBASIC18.42■□□□□ 0.54
KCNA3P22001 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC18.42■□□□□ 0.54
KCNA3P22001 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.42■□□□□ 0.54
KCNA3P22001 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.42■□□□□ 0.54
KCNA3P22001 AC006122.1-201ENST00000493323 440 ntBASIC18.42■□□□□ 0.54
KCNA3P22001 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
KCNA3P22001 AP003398.1-201ENST00000531124 318 ntBASIC18.42■□□□□ 0.54
KCNA3P22001 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.42■□□□□ 0.54
KCNA3P22001 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC18.42■□□□□ 0.54
KCNA3P22001 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.42■□□□□ 0.54
KCNA3P22001 AP003392.6-201ENST00000607709 325 ntBASIC18.42■□□□□ 0.54
KCNA3P22001 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.42■□□□□ 0.54
KCNA3P22001 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KCNA3P22001 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KCNA3P22001 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.42■□□□□ 0.54
KCNA3P22001 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KCNA3P22001 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KCNA3P22001 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
KCNA3P22001 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.41■□□□□ 0.54
KCNA3P22001 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
KCNA3P22001 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.41■□□□□ 0.54
KCNA3P22001 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.41■□□□□ 0.54
KCNA3P22001 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.41■□□□□ 0.54
KCNA3P22001 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
KCNA3P22001 AC022211.2-201ENST00000585075 2527 ntBASIC18.41■□□□□ 0.54
KCNA3P22001 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.41■□□□□ 0.54
KCNA3P22001 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.41■□□□□ 0.54
KCNA3P22001 AL807761.2-201ENST00000422849 729 ntBASIC18.41■□□□□ 0.54
KCNA3P22001 DUTP3-201ENST00000450025 415 ntBASIC18.41■□□□□ 0.54
KCNA3P22001 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.41■□□□□ 0.54
KCNA3P22001 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.41■□□□□ 0.54
KCNA3P22001 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC18.41■□□□□ 0.54
KCNA3P22001 AL118516.1-201ENST00000564152 670 ntBASIC18.41■□□□□ 0.54
KCNA3P22001 AC093752.3-201ENST00000567343 901 ntBASIC18.41■□□□□ 0.54
KCNA3P22001 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.41■□□□□ 0.54
KCNA3P22001 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.41■□□□□ 0.54
KCNA3P22001 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.41■□□□□ 0.54
KCNA3P22001 AC087392.5-201ENST00000612517 489 ntBASIC18.41■□□□□ 0.54
KCNA3P22001 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
KCNA3P22001 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
KCNA3P22001 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.41■□□□□ 0.54
KCNA3P22001 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms