Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 AC084364.1-201ENST00000551967 1556 ntBASIC12.91□□□□□ -0.34
CXCL3P19876 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CXCL3P19876 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCL3P19876 AC004899.2-201ENST00000622993 3860 ntBASIC12.91□□□□□ -0.34
CXCL3P19876 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 PMS2P4-201ENST00000412466 1052 ntBASIC12.91□□□□□ -0.34
CXCL3P19876 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCL3P19876 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.91□□□□□ -0.34
CXCL3P19876 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.91□□□□□ -0.34
CXCL3P19876 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.91□□□□□ -0.34
CXCL3P19876 AC104819.1-201ENST00000504587 486 ntBASIC12.91□□□□□ -0.34
CXCL3P19876 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.91□□□□□ -0.34
CXCL3P19876 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.91□□□□□ -0.34
CXCL3P19876 MIR3909-201ENST00000579518 119 ntBASIC12.91□□□□□ -0.34
CXCL3P19876 NKAPP1-205ENST00000585790 367 ntBASIC12.91□□□□□ -0.34
CXCL3P19876 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.91□□□□□ -0.34
CXCL3P19876 AC092329.2-201ENST00000598402 547 ntBASIC12.91□□□□□ -0.34
CXCL3P19876 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.91□□□□□ -0.34
CXCL3P19876 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCL3P19876 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.91□□□□□ -0.34
CXCL3P19876 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.91□□□□□ -0.34
CXCL3P19876 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CXCL3P19876 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CXCL3P19876 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCL3P19876 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CXCL3P19876 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCL3P19876 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CXCL3P19876 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CXCL3P19876 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CXCL3P19876 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CXCL3P19876 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.91□□□□□ -0.34
CXCL3P19876 AL023775.1-201ENST00000454907 1746 ntBASIC12.91□□□□□ -0.34
CXCL3P19876 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.91□□□□□ -0.34
CXCL3P19876 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.91□□□□□ -0.34
CXCL3P19876 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.9□□□□□ -0.34
CXCL3P19876 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CXCL3P19876 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.9□□□□□ -0.34
CXCL3P19876 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
CXCL3P19876 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCL3P19876 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.9□□□□□ -0.34
CXCL3P19876 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.9□□□□□ -0.34
CXCL3P19876 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCL3P19876 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCL3P19876 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
CXCL3P19876 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
CXCL3P19876 GHSR-202ENST00000427970 912 ntBASIC12.9□□□□□ -0.34
CXCL3P19876 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.9□□□□□ -0.34
CXCL3P19876 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.9□□□□□ -0.34
CXCL3P19876 AC139887.3-201ENST00000568585 713 ntBASIC12.9□□□□□ -0.34
CXCL3P19876 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CXCL3P19876 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
CXCL3P19876 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CXCL3P19876 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.9□□□□□ -0.34
CXCL3P19876 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CXCL3P19876 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
CXCL3P19876 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.9□□□□□ -0.34
CXCL3P19876 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CXCL3P19876 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 572.1 ms