Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
ATF3P18847 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC20.66■□□□□ 0.9
ATF3P18847 BCAS2P2-201ENST00000425064 674 ntBASIC20.66■□□□□ 0.9
ATF3P18847 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 PSMD4P1-201ENST00000433951 1109 ntBASIC20.66■□□□□ 0.9
ATF3P18847 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC20.66■□□□□ 0.9
ATF3P18847 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC20.66■□□□□ 0.9
ATF3P18847 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ATF3P18847 AC004837.1-201ENST00000446267 564 ntBASIC20.66■□□□□ 0.9
ATF3P18847 RPSAP15-201ENST00000448168 861 ntBASIC20.66■□□□□ 0.9
ATF3P18847 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC20.66■□□□□ 0.9
ATF3P18847 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC20.66■□□□□ 0.9
ATF3P18847 AC024293.1-201ENST00000467930 498 ntBASIC20.66■□□□□ 0.9
ATF3P18847 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC20.66■□□□□ 0.9
ATF3P18847 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ATF3P18847 MIR3180-2-201ENST00000581748 88 ntBASIC20.66■□□□□ 0.9
ATF3P18847 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.66■□□□□ 0.9
ATF3P18847 AP001184.1-201ENST00000637936 376 ntBASIC20.66■□□□□ 0.9
ATF3P18847 AL138725.1-201ENST00000407347 1314 ntBASIC20.66■□□□□ 0.9
ATF3P18847 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATF3P18847 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ATF3P18847 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.66■□□□□ 0.9
ATF3P18847 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ATF3P18847 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ATF3P18847 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.66■□□□□ 0.9
ATF3P18847 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ATF3P18847 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ATF3P18847 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATF3P18847 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.65■□□□□ 0.9
ATF3P18847 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.65■□□□□ 0.9
ATF3P18847 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.65■□□□□ 0.9
ATF3P18847 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
ATF3P18847 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.65■□□□□ 0.9
ATF3P18847 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC20.65■□□□□ 0.9
ATF3P18847 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC20.65■□□□□ 0.9
ATF3P18847 AL157407.1-201ENST00000435784 904 ntBASIC20.65■□□□□ 0.9
ATF3P18847 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC20.65■□□□□ 0.9
ATF3P18847 AREG-202ENST00000502307 956 ntTSL 5 BASIC20.65■□□□□ 0.9
ATF3P18847 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ATF3P18847 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ATF3P18847 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATF3P18847 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATF3P18847 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC20.64■□□□□ 0.9
ATF3P18847 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATF3P18847 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ATF3P18847 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATF3P18847 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATF3P18847 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.64■□□□□ 0.9
ATF3P18847 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATF3P18847 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATF3P18847 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATF3P18847 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF3P18847 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATF3P18847 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF3P18847 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF3P18847 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ATF3P18847 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC20.64■□□□□ 0.89
ATF3P18847 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATF3P18847 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATF3P18847 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC20.64■□□□□ 0.89
ATF3P18847 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ATF3P18847 MRPL22P1-201ENST00000505398 616 ntBASIC20.64■□□□□ 0.89
ATF3P18847 AC026410.1-201ENST00000507366 1101 ntBASIC20.64■□□□□ 0.89
ATF3P18847 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATF3P18847 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC20.64■□□□□ 0.89
ATF3P18847 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC20.64■□□□□ 0.89
ATF3P18847 RN7SL470P-201ENST00000583069 259 ntBASIC20.64■□□□□ 0.89
ATF3P18847 MIR3188-201ENST00000583494 85 ntBASIC20.64■□□□□ 0.89
ATF3P18847 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.64■□□□□ 0.89
ATF3P18847 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC20.64■□□□□ 0.89
ATF3P18847 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC20.64■□□□□ 0.89
ATF3P18847 AC009560.1-201ENST00000620208 434 ntBASIC20.64■□□□□ 0.89
ATF3P18847 AC006449.5-201ENST00000610658 2098 ntBASIC20.64■□□□□ 0.89
ATF3P18847 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms