Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL11A1P12107 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL11A1P12107 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.02■□□□□ 0.32
COL11A1P12107 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.02■□□□□ 0.31
COL11A1P12107 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.02■□□□□ 0.31
COL11A1P12107 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.02■□□□□ 0.31
COL11A1P12107 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.02■□□□□ 0.31
COL11A1P12107 PUDPP3-201ENST00000445368 636 ntBASIC17.02■□□□□ 0.31
COL11A1P12107 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 BX088702.1-201ENST00000610784 235 ntBASIC17.02■□□□□ 0.31
COL11A1P12107 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 WASH3P-207ENST00000560956 1394 ntBASIC17.02■□□□□ 0.31
COL11A1P12107 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.02■□□□□ 0.31
COL11A1P12107 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
COL11A1P12107 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
COL11A1P12107 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL11A1P12107 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.01■□□□□ 0.31
COL11A1P12107 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COL11A1P12107 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COL11A1P12107 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 CAP2P1-201ENST00000557743 1390 ntBASIC17.01■□□□□ 0.31
COL11A1P12107 OR2R1P-201ENST00000441404 914 ntBASIC17.01■□□□□ 0.31
COL11A1P12107 RN7SL67P-201ENST00000492147 296 ntBASIC17.01■□□□□ 0.31
COL11A1P12107 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 AC018635.2-201ENST00000608625 364 ntBASIC17.01■□□□□ 0.31
COL11A1P12107 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COL11A1P12107 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.01■□□□□ 0.31
COL11A1P12107 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.01■□□□□ 0.31
COL11A1P12107 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.01■□□□□ 0.31
COL11A1P12107 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.01■□□□□ 0.31
COL11A1P12107 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COL11A1P12107 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.01■□□□□ 0.31
COL11A1P12107 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.01■□□□□ 0.31
COL11A1P12107 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.01■□□□□ 0.31
COL11A1P12107 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL11A1P12107 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 AC011742.3-201ENST00000439053 820 ntBASIC17■□□□□ 0.31
COL11A1P12107 CICP12-201ENST00000455801 843 ntBASIC17■□□□□ 0.31
COL11A1P12107 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17■□□□□ 0.31
COL11A1P12107 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17■□□□□ 0.31
COL11A1P12107 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COL11A1P12107 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17■□□□□ 0.31
COL11A1P12107 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17■□□□□ 0.31
COL11A1P12107 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17■□□□□ 0.31
COL11A1P12107 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17■□□□□ 0.31
COL11A1P12107 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COL11A1P12107 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17■□□□□ 0.31
COL11A1P12107 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17■□□□□ 0.31
COL11A1P12107 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17■□□□□ 0.31
COL11A1P12107 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17■□□□□ 0.31
COL11A1P12107 Z97180.1-201ENST00000445173 988 ntBASIC17■□□□□ 0.31
COL11A1P12107 AC006122.1-201ENST00000493323 440 ntBASIC17■□□□□ 0.31
COL11A1P12107 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17■□□□□ 0.31
COL11A1P12107 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17■□□□□ 0.31
COL11A1P12107 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COL11A1P12107 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
COL11A1P12107 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COL11A1P12107 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17■□□□□ 0.31
COL11A1P12107 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17■□□□□ 0.31
COL11A1P12107 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms