Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 TNRC18P3-201ENST00000441896 2691 ntBASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 AP000593.2-201ENST00000542775 1433 ntBASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 AC068587.6-202ENST00000641839 5619 ntBASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 AC006335.1-201ENST00000445200 547 ntBASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 IGLV3-15-201ENST00000518356 244 ntBASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 MIR3147-201ENST00000577811 66 ntBASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 MIR4783-201ENST00000580343 82 ntBASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 AC012044.1-201ENST00000603431 297 ntBASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 AL353770.1-201ENST00000614915 403 ntBASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 FER1L4-210ENST00000615531 5998 ntBASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 AL157414.3-201ENST00000624276 1954 ntBASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSB-PGBD3P0DP91 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 RPL18P13-201ENST00000478088 569 ntBASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 AC090857.1-201ENST00000527400 390 ntBASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 IQSEC3P1-201ENST00000538799 536 ntBASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 AC005324.6-201ENST00000587972 613 ntBASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 AC009955.4-201ENST00000597192 544 ntBASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CSB-PGBD3P0DP91 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CSB-PGBD3P0DP91 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms