Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC6P09630 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HOXC6P09630 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC6P09630 AC010141.1-201ENST00000411585 623 ntBASIC17.13■□□□□ 0.33
HOXC6P09630 AC234782.1-201ENST00000451950 919 ntBASIC17.13■□□□□ 0.33
HOXC6P09630 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC6P09630 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXC6P09630 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC6P09630 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXC6P09630 AC090164.2-201ENST00000611487 516 ntBASIC17.13■□□□□ 0.33
HOXC6P09630 AL136295.7-201ENST00000619226 1200 ntBASIC17.13■□□□□ 0.33
HOXC6P09630 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 AL360270.3-201ENST00000609118 1348 ntBASIC17.13■□□□□ 0.33
HOXC6P09630 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HOXC6P09630 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC6P09630 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 TNRC18P3-201ENST00000441896 2691 ntBASIC17.13■□□□□ 0.33
HOXC6P09630 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC6P09630 REXO1L5P-201ENST00000622260 2098 ntBASIC17.12■□□□□ 0.33
HOXC6P09630 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HOXC6P09630 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HOXC6P09630 AP005117.1-202ENST00000581724 1908 ntBASIC17.12■□□□□ 0.33
HOXC6P09630 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC6P09630 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.12■□□□□ 0.33
HOXC6P09630 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 UFM1-202ENST00000379649 846 ntTSL 4 BASIC17.12■□□□□ 0.33
HOXC6P09630 FAM58BP-201ENST00000439056 645 ntBASIC17.12■□□□□ 0.33
HOXC6P09630 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC6P09630 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC6P09630 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC6P09630 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.12■□□□□ 0.33
HOXC6P09630 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC6P09630 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC6P09630 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC6P09630 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.12■□□□□ 0.33
HOXC6P09630 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC6P09630 AC002472.3-201ENST00000640124 621 ntBASIC17.12■□□□□ 0.33
HOXC6P09630 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 AL157791.1-201ENST00000553667 1699 ntBASIC17.12■□□□□ 0.33
HOXC6P09630 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
HOXC6P09630 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
HOXC6P09630 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC6P09630 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC6P09630 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC6P09630 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HOXC6P09630 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC6P09630 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC6P09630 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC6P09630 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HOXC6P09630 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
HOXC6P09630 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXC6P09630 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
HOXC6P09630 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXC6P09630 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 AL353637.1-201ENST00000451571 732 ntBASIC17.11■□□□□ 0.33
HOXC6P09630 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC6P09630 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HOXC6P09630 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC6P09630 AC100827.2-201ENST00000563214 1194 ntBASIC17.11■□□□□ 0.33
HOXC6P09630 DUX4L46-201ENST00000566845 751 ntBASIC17.11■□□□□ 0.33
HOXC6P09630 SNORD3B-2-202ENST00000571722 791 ntBASIC17.11■□□□□ 0.33
HOXC6P09630 AL132994.2-201ENST00000603120 687 ntBASIC17.11■□□□□ 0.33
HOXC6P09630 AP000346.4-201ENST00000614827 381 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms