Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFP01375 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFP01375 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.91□□□□□ -0.02
TNFP01375 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.91□□□□□ -0.02
TNFP01375 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFP01375 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
TNFP01375 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFP01375 AC020658.6-201ENST00000623564 1870 ntBASIC14.91□□□□□ -0.02
TNFP01375 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TNFP01375 AL360270.3-201ENST00000609118 1348 ntBASIC14.91□□□□□ -0.02
TNFP01375 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TNFP01375 NORAD-201ENST00000565493 5339 ntBASIC14.9□□□□□ -0.02
TNFP01375 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TNFP01375 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFP01375 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TNFP01375 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFP01375 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFP01375 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TNFP01375 POM121L8P-201ENST00000417732 1281 ntBASIC14.9□□□□□ -0.02
TNFP01375 HLA-K-203ENST00000430151 1046 ntBASIC14.9□□□□□ -0.02
TNFP01375 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFP01375 GOLGA2P4-201ENST00000441462 777 ntBASIC14.9□□□□□ -0.02
TNFP01375 POM121L9P-203ENST00000441984 1285 ntBASIC14.9□□□□□ -0.02
TNFP01375 CNN2P10-201ENST00000443067 918 ntBASIC14.9□□□□□ -0.02
TNFP01375 COX5BP1-201ENST00000507622 393 ntBASIC14.9□□□□□ -0.02
TNFP01375 FAM86HP-204ENST00000513466 959 ntBASIC14.9□□□□□ -0.02
TNFP01375 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFP01375 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TNFP01375 DUX4L47-201ENST00000566374 394 ntBASIC14.9□□□□□ -0.02
TNFP01375 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFP01375 EEF1DP1-201ENST00000585891 896 ntBASIC14.9□□□□□ -0.02
TNFP01375 GPR182-203ENST00000622922 591 ntBASIC14.9□□□□□ -0.02
TNFP01375 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFP01375 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFP01375 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFP01375 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TNFP01375 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TNFP01375 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFP01375 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFP01375 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFP01375 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFP01375 AC012508.2-201ENST00000567613 1472 ntBASIC14.89□□□□□ -0.03
TNFP01375 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TNFP01375 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TNFP01375 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFP01375 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFP01375 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 AC015818.8-201ENST00000587907 1519 ntBASIC14.89□□□□□ -0.03
TNFP01375 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
TNFP01375 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFP01375 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFP01375 MTX1P1-201ENST00000440904 838 ntBASIC14.89□□□□□ -0.03
TNFP01375 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.89□□□□□ -0.03
TNFP01375 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFP01375 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TNFP01375 AP006547.1-201ENST00000563435 692 ntBASIC14.89□□□□□ -0.03
TNFP01375 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.89□□□□□ -0.03
TNFP01375 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
TNFP01375 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFP01375 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFP01375 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFP01375 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms