Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 AC145423.3-201ENST00000615987 467 ntBASIC15.5■□□□□ 0.07
PRAMEF11O60813 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF11O60813 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF11O60813 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 LINC00528-201ENST00000600723 2160 ntBASIC15.49■□□□□ 0.07
PRAMEF11O60813 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 AC092933.1-201ENST00000393644 945 ntBASIC15.49■□□□□ 0.07
PRAMEF11O60813 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 BCRP2-202ENST00000447763 634 ntBASIC15.49■□□□□ 0.07
PRAMEF11O60813 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 BCRP6-201ENST00000510112 632 ntBASIC15.49■□□□□ 0.07
PRAMEF11O60813 BCRP7-201ENST00000511549 544 ntBASIC15.49■□□□□ 0.07
PRAMEF11O60813 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 AL022328.1-201ENST00000610050 478 ntBASIC15.49■□□□□ 0.07
PRAMEF11O60813 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PRAMEF11O60813 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEF11O60813 AC018665.1-201ENST00000622927 1362 ntBASIC15.49■□□□□ 0.07
PRAMEF11O60813 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
PRAMEF11O60813 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEF11O60813 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms