Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CALR4P-201ENST00000431943 946 ntBASIC17.47■□□□□ 0.39
ATP2A1O14983 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A1O14983 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.47■□□□□ 0.39
ATP2A1O14983 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A1O14983 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP2A1O14983 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ATP2A1O14983 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A1O14983 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ATP2A1O14983 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A1O14983 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ATP2A1O14983 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A1O14983 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A1O14983 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP2A1O14983 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A1O14983 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A1O14983 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A1O14983 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A1O14983 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ATP2A1O14983 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A1O14983 AC018735.1-201ENST00000437208 1502 ntBASIC17.47■□□□□ 0.39
ATP2A1O14983 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A1O14983 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A1O14983 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ATP2A1O14983 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP2A1O14983 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP2A1O14983 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ATP2A1O14983 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP2A1O14983 GHSR-202ENST00000427970 912 ntBASIC17.46■□□□□ 0.39
ATP2A1O14983 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP2A1O14983 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP2A1O14983 MESTP3-201ENST00000503460 968 ntBASIC17.46■□□□□ 0.39
ATP2A1O14983 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP2A1O14983 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP2A1O14983 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 OR10B1P-201ENST00000601666 907 ntBASIC17.46■□□□□ 0.39
ATP2A1O14983 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.46■□□□□ 0.39
ATP2A1O14983 AC244452.3-201ENST00000636814 210 ntBASIC17.46■□□□□ 0.39
ATP2A1O14983 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP2A1O14983 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
ATP2A1O14983 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.46■□□□□ 0.39
ATP2A1O14983 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 AC067930.6-201ENST00000623257 4947 ntBASIC17.46■□□□□ 0.39
ATP2A1O14983 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ATP2A1O14983 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATP2A1O14983 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
ATP2A1O14983 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
ATP2A1O14983 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATP2A1O14983 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
ATP2A1O14983 AL360270.3-201ENST00000609118 1348 ntBASIC17.46■□□□□ 0.38
ATP2A1O14983 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATP2A1O14983 NORAD-201ENST00000565493 5339 ntBASIC17.45■□□□□ 0.38
ATP2A1O14983 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.45■□□□□ 0.38
ATP2A1O14983 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ATP2A1O14983 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ATP2A1O14983 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP2A1O14983 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ATP2A1O14983 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP2A1O14983 AC138028.6-201ENST00000616106 1482 ntBASIC17.45■□□□□ 0.38
ATP2A1O14983 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP2A1O14983 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 CICP13-201ENST00000422015 2789 ntBASIC17.45■□□□□ 0.38
ATP2A1O14983 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP2A1O14983 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ATP2A1O14983 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.45■□□□□ 0.38
ATP2A1O14983 CHMP1AP1-201ENST00000445563 662 ntBASIC17.45■□□□□ 0.38
ATP2A1O14983 BX284668.4-201ENST00000453917 508 ntBASIC17.45■□□□□ 0.38
ATP2A1O14983 AKR7A2P1-201ENST00000460134 915 ntBASIC17.45■□□□□ 0.38
ATP2A1O14983 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP2A1O14983 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.45■□□□□ 0.38
ATP2A1O14983 PPY2P-201ENST00000582808 702 ntBASIC17.45■□□□□ 0.38
ATP2A1O14983 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP2A1O14983 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP2A1O14983 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.45■□□□□ 0.38
ATP2A1O14983 AC138466.3-201ENST00000619983 221 ntBASIC17.45■□□□□ 0.38
ATP2A1O14983 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.45■□□□□ 0.38
ATP2A1O14983 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms