Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SALL1Q9NSC2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.33■□□□□ 0.52
SALL1Q9NSC2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 KRT8P13-201ENST00000463294 1010 ntBASIC18.32■□□□□ 0.52
SALL1Q9NSC2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 FTLP10-202ENST00000505798 471 ntBASIC18.32■□□□□ 0.52
SALL1Q9NSC2 AC026434.2-201ENST00000506094 1078 ntBASIC18.32■□□□□ 0.52
SALL1Q9NSC2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 AC103810.3-201ENST00000583567 96 ntBASIC18.32■□□□□ 0.52
SALL1Q9NSC2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 AC012508.2-201ENST00000567613 1472 ntBASIC18.32■□□□□ 0.52
SALL1Q9NSC2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SALL1Q9NSC2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 AL157414.3-201ENST00000624276 1954 ntBASIC18.31■□□□□ 0.52
SALL1Q9NSC2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 CHMP1AP1-201ENST00000445563 662 ntBASIC18.31■□□□□ 0.52
SALL1Q9NSC2 AC104306.2-201ENST00000451877 341 ntBASIC18.31■□□□□ 0.52
SALL1Q9NSC2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 MIR3615-201ENST00000581999 87 ntBASIC18.31■□□□□ 0.52
SALL1Q9NSC2 PPY2P-201ENST00000582808 702 ntBASIC18.31■□□□□ 0.52
SALL1Q9NSC2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 AL022328.3-201ENST00000607943 679 ntBASIC18.31■□□□□ 0.52
SALL1Q9NSC2 AC091951.1-201ENST00000512854 2465 ntBASIC18.31■□□□□ 0.52
SALL1Q9NSC2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 AC126365.1-201ENST00000578585 1514 ntBASIC18.31■□□□□ 0.52
SALL1Q9NSC2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SALL1Q9NSC2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms