Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 GPAA1P2-201ENST00000417923 928 ntBASIC15.9■□□□□ 0.14
HPS4Q9NQG7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.9■□□□□ 0.14
HPS4Q9NQG7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 AC132938.4-201ENST00000623835 848 ntBASIC15.9■□□□□ 0.14
HPS4Q9NQG7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HPS4Q9NQG7 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
HPS4Q9NQG7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 AC245100.3-201ENST00000441281 285 ntBASIC15.89■□□□□ 0.13
HPS4Q9NQG7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 AC025181.2-201ENST00000606994 802 ntBASIC15.89■□□□□ 0.13
HPS4Q9NQG7 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.89■□□□□ 0.13
HPS4Q9NQG7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 AC023824.1-201ENST00000562945 2975 ntBASIC15.89■□□□□ 0.13
HPS4Q9NQG7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HPS4Q9NQG7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 KLF2P2-201ENST00000416807 1039 ntBASIC15.88■□□□□ 0.13
HPS4Q9NQG7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 AL118558.3-201ENST00000607414 1079 ntBASIC15.88■□□□□ 0.13
HPS4Q9NQG7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HPS4Q9NQG7 AHCYP2-201ENST00000430630 1300 ntBASIC15.88■□□□□ 0.13
HPS4Q9NQG7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms