Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 KRT8P19-201ENST00000551916 1455 ntBASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 FAM90A7P-201ENST00000382628 1395 ntBASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 FAM90A23P-201ENST00000400136 1395 ntBASIC17.66■□□□□ 0.42
CDK5RAP2Q96SN8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 BX088702.1-201ENST00000610784 235 ntBASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 AL157813.1-201ENST00000612996 587 ntBASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 AC015967.2-201ENST00000624092 234 ntBASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 AC006435.4-201ENST00000625037 234 ntBASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 AL356737.1-201ENST00000634391 234 ntBASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 CICP6-201ENST00000457191 2729 ntBASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 KRT8P21-201ENST00000430398 1491 ntBASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 PUDPP3-201ENST00000445368 636 ntBASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 RN7SL11P-201ENST00000471305 293 ntBASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 DUX4L46-201ENST00000566845 751 ntBASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.65■□□□□ 0.42
CDK5RAP2Q96SN8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 TUBBP5-203ENST00000508529 1334 ntBASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 AC007292.2-201ENST00000593524 1812 ntBASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 OR2R1P-201ENST00000441404 914 ntBASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 AL596276.2-201ENST00000447525 331 ntBASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 RCC2P8-201ENST00000502779 1035 ntBASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms