Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 RNU1-114P-201ENST00000365297 166 ntBASIC15.81■□□□□ 0.12
RPRD1AQ96P16 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 U91328.1-201ENST00000437528 223 ntBASIC15.81■□□□□ 0.12
RPRD1AQ96P16 KRT8P44-201ENST00000441609 1350 ntBASIC15.81■□□□□ 0.12
RPRD1AQ96P16 AL355864.2-201ENST00000447420 863 ntBASIC15.81■□□□□ 0.12
RPRD1AQ96P16 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 AC126365.1-201ENST00000578585 1514 ntBASIC15.81■□□□□ 0.12
RPRD1AQ96P16 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RPRD1AQ96P16 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 AC138035.3-201ENST00000622706 2791 ntBASIC15.8■□□□□ 0.12
RPRD1AQ96P16 AC018665.1-201ENST00000622927 1362 ntBASIC15.8■□□□□ 0.12
RPRD1AQ96P16 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 AL645937.2-201ENST00000396808 931 ntBASIC15.8■□□□□ 0.12
RPRD1AQ96P16 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.8■□□□□ 0.12
RPRD1AQ96P16 AC104457.1-201ENST00000401024 814 ntBASIC15.8■□□□□ 0.12
RPRD1AQ96P16 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 BCRP2-202ENST00000447763 634 ntBASIC15.8■□□□□ 0.12
RPRD1AQ96P16 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 BCRP6-201ENST00000510112 632 ntBASIC15.8■□□□□ 0.12
RPRD1AQ96P16 BCRP7-201ENST00000511549 544 ntBASIC15.8■□□□□ 0.12
RPRD1AQ96P16 AP001889.1-201ENST00000525414 633 ntBASIC15.8■□□□□ 0.12
RPRD1AQ96P16 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RPRD1AQ96P16 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RPRD1AQ96P16 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms