Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.31■□□□□ 0.36
FGD4Q96M96 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.31■□□□□ 0.36
FGD4Q96M96 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FGD4Q96M96 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
FGD4Q96M96 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
FGD4Q96M96 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.3■□□□□ 0.36
FGD4Q96M96 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.3■□□□□ 0.36
FGD4Q96M96 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FGD4Q96M96 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
FGD4Q96M96 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.3■□□□□ 0.36
FGD4Q96M96 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.3■□□□□ 0.36
FGD4Q96M96 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.3■□□□□ 0.36
FGD4Q96M96 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.3■□□□□ 0.36
FGD4Q96M96 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.3■□□□□ 0.36
FGD4Q96M96 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.3■□□□□ 0.36
FGD4Q96M96 CHMP1AP1-201ENST00000445563 662 ntBASIC17.3■□□□□ 0.36
FGD4Q96M96 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
FGD4Q96M96 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.3■□□□□ 0.36
FGD4Q96M96 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.3■□□□□ 0.36
FGD4Q96M96 DUX4L47-201ENST00000566374 394 ntBASIC17.3■□□□□ 0.36
FGD4Q96M96 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FGD4Q96M96 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.3■□□□□ 0.36
FGD4Q96M96 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
FGD4Q96M96 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
FGD4Q96M96 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
FGD4Q96M96 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FGD4Q96M96 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FGD4Q96M96 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.29■□□□□ 0.36
FGD4Q96M96 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.29■□□□□ 0.36
FGD4Q96M96 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
FGD4Q96M96 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FGD4Q96M96 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
FGD4Q96M96 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.29■□□□□ 0.36
FGD4Q96M96 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.29■□□□□ 0.36
FGD4Q96M96 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.29■□□□□ 0.36
FGD4Q96M96 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.29■□□□□ 0.36
FGD4Q96M96 AC079178.1-201ENST00000420915 656 ntBASIC17.29■□□□□ 0.36
FGD4Q96M96 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.29■□□□□ 0.36
FGD4Q96M96 HIST2H2BB-201ENST00000449108 381 ntBASIC17.29■□□□□ 0.36
FGD4Q96M96 AC005077.2-201ENST00000449786 690 ntBASIC17.29■□□□□ 0.36
FGD4Q96M96 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.29■□□□□ 0.36
FGD4Q96M96 AC022616.1-201ENST00000518688 554 ntBASIC17.29■□□□□ 0.36
FGD4Q96M96 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.29■□□□□ 0.36
FGD4Q96M96 AC005730.2-201ENST00000564549 1184 ntBASIC17.29■□□□□ 0.36
FGD4Q96M96 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 CICP13-201ENST00000422015 2789 ntBASIC17.29■□□□□ 0.36
FGD4Q96M96 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FGD4Q96M96 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.29■□□□□ 0.36
FGD4Q96M96 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
FGD4Q96M96 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FGD4Q96M96 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
FGD4Q96M96 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.28■□□□□ 0.36
FGD4Q96M96 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
FGD4Q96M96 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.28■□□□□ 0.36
FGD4Q96M96 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FGD4Q96M96 CLUHP2-201ENST00000426660 1303 ntBASIC17.28■□□□□ 0.36
FGD4Q96M96 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.28■□□□□ 0.36
FGD4Q96M96 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.28■□□□□ 0.36
FGD4Q96M96 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
FGD4Q96M96 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FGD4Q96M96 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
FGD4Q96M96 SLC25A24P2-201ENST00000415059 510 ntBASIC17.28■□□□□ 0.36
FGD4Q96M96 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FGD4Q96M96 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.28■□□□□ 0.36
FGD4Q96M96 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.28■□□□□ 0.36
FGD4Q96M96 AC126915.1-201ENST00000522847 1038 ntBASIC17.28■□□□□ 0.36
FGD4Q96M96 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms