Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35BQ8NCS4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TMEM35BQ8NCS4 MIR600HG-201ENST00000449175 5984 ntBASIC16.28■□□□□ 0.2
TMEM35BQ8NCS4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35BQ8NCS4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35BQ8NCS4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM35BQ8NCS4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TMEM35BQ8NCS4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM35BQ8NCS4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM35BQ8NCS4 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
TMEM35BQ8NCS4 ACE3P-201ENST00000423435 1973 ntBASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 AL138799.1-201ENST00000448213 1675 ntBASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 RN7SL204P-201ENST00000582831 262 ntBASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 AC093813.1-201ENST00000605066 256 ntBASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 MIR8072-201ENST00000614241 80 ntBASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM35BQ8NCS4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM35BQ8NCS4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 AC134915.1-201ENST00000426461 574 ntBASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 AL353779.1-201ENST00000434793 351 ntBASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 AC123567.1-201ENST00000548294 1261 ntBASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
TMEM35BQ8NCS4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms