Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 AC041040.2-201ENST00000622926 2899 ntBASIC15.52■□□□□ 0.08
RAPH1Q70E73 AJ011931.1-201ENST00000618749 2492 ntBASIC15.52■□□□□ 0.08
RAPH1Q70E73 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 SPDYE17-201ENST00000412399 783 ntBASIC15.52■□□□□ 0.08
RAPH1Q70E73 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 AC093520.2-201ENST00000561830 333 ntBASIC15.52■□□□□ 0.08
RAPH1Q70E73 AC026150.2-201ENST00000564693 1156 ntBASIC15.52■□□□□ 0.08
RAPH1Q70E73 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 AC004835.2-201ENST00000603762 682 ntBASIC15.52■□□□□ 0.08
RAPH1Q70E73 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 AC007967.4-201ENST00000614700 386 ntBASIC15.52■□□□□ 0.08
RAPH1Q70E73 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAPH1Q70E73 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAPH1Q70E73 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAPH1Q70E73 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.52■□□□□ 0.07
RAPH1Q70E73 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAPH1Q70E73 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAPH1Q70E73 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAPH1Q70E73 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.52■□□□□ 0.07
RAPH1Q70E73 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAPH1Q70E73 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAPH1Q70E73 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
RAPH1Q70E73 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.52■□□□□ 0.07
RAPH1Q70E73 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAPH1Q70E73 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.52■□□□□ 0.07
RAPH1Q70E73 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAPH1Q70E73 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
RAPH1Q70E73 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAPH1Q70E73 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 WASH3P-207ENST00000560956 1394 ntBASIC15.51■□□□□ 0.07
RAPH1Q70E73 FO538757.1-201ENST00000623083 1397 ntBASIC15.51■□□□□ 0.07
RAPH1Q70E73 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 HIST3H2BA-201ENST00000436555 524 ntBASIC15.51■□□□□ 0.07
RAPH1Q70E73 TARDBPP1-201ENST00000442013 1203 ntBASIC15.51■□□□□ 0.07
RAPH1Q70E73 SPDYE14P-201ENST00000442619 822 ntBASIC15.51■□□□□ 0.07
RAPH1Q70E73 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 AP000344.2-201ENST00000512987 629 ntBASIC15.51■□□□□ 0.07
RAPH1Q70E73 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 MIR6080-201ENST00000617359 66 ntBASIC15.51■□□□□ 0.07
RAPH1Q70E73 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.51■□□□□ 0.07
RAPH1Q70E73 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAPH1Q70E73 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAPH1Q70E73 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 KRT8P12-202ENST00000472924 1397 ntBASIC15.5■□□□□ 0.07
RAPH1Q70E73 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAPH1Q70E73 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAPH1Q70E73 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RAPH1Q70E73 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAPH1Q70E73 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RAPH1Q70E73 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.5■□□□□ 0.07
RAPH1Q70E73 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms