Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13CQ709C8 RPL18AP3-201ENST00000462885 528 ntBASIC12.47□□□□□ -0.41
VPS13CQ709C8 AC103810.10-201ENST00000606504 343 ntBASIC12.47□□□□□ -0.41
VPS13CQ709C8 AL513523.2-202ENST00000427283 2040 ntBASIC12.47□□□□□ -0.41
VPS13CQ709C8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13CQ709C8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.47□□□□□ -0.41
VPS13CQ709C8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VPS13CQ709C8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VPS13CQ709C8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC026434.2-201ENST00000506094 1078 ntBASIC12.46□□□□□ -0.41
VPS13CQ709C8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC069224.1-201ENST00000566372 1715 ntBASIC12.46□□□□□ -0.41
VPS13CQ709C8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC244250.3-201ENST00000620749 366 ntBASIC12.46□□□□□ -0.41
VPS13CQ709C8 AL603764.1-201ENST00000636452 321 ntBASIC12.46□□□□□ -0.41
VPS13CQ709C8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
VPS13CQ709C8 AC023090.2-201ENST00000625182 2110 ntBASIC12.46□□□□□ -0.41
VPS13CQ709C8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13CQ709C8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13CQ709C8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13CQ709C8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
VPS13CQ709C8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13CQ709C8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13CQ709C8 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13CQ709C8 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13CQ709C8 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13CQ709C8 LINC00634-202ENST00000505157 222 ntBASIC12.46□□□□□ -0.42
VPS13CQ709C8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.46□□□□□ -0.42
VPS13CQ709C8 ETV2-207ENST00000619399 994 ntTSL 5 BASIC12.46□□□□□ -0.42
VPS13CQ709C8 AL132780.4-201ENST00000624870 1135 ntBASIC12.46□□□□□ -0.42
VPS13CQ709C8 PLS3-210ENST00000626746 216 ntTSL 4 BASIC12.46□□□□□ -0.42
VPS13CQ709C8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.46□□□□□ -0.42
VPS13CQ709C8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13CQ709C8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13CQ709C8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.46□□□□□ -0.42
VPS13CQ709C8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
VPS13CQ709C8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC12.45□□□□□ -0.42
VPS13CQ709C8 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.45□□□□□ -0.42
VPS13CQ709C8 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC12.45□□□□□ -0.42
VPS13CQ709C8 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.45□□□□□ -0.42
VPS13CQ709C8 AC009560.1-201ENST00000620208 434 ntBASIC12.45□□□□□ -0.42
VPS13CQ709C8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 LYPLA2P1-203ENST00000447689 696 ntBASIC12.45□□□□□ -0.42
VPS13CQ709C8 AC107464.3-201ENST00000609172 737 ntBASIC12.45□□□□□ -0.42
VPS13CQ709C8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.45□□□□□ -0.42
VPS13CQ709C8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13CQ709C8 RN7SKP230-201ENST00000365642 335 ntBASIC12.45□□□□□ -0.42
VPS13CQ709C8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.45□□□□□ -0.42
VPS13CQ709C8 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC12.45□□□□□ -0.42
VPS13CQ709C8 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.45□□□□□ -0.42
VPS13CQ709C8 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.45□□□□□ -0.42
VPS13CQ709C8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.45□□□□□ -0.42
VPS13CQ709C8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.45□□□□□ -0.42
VPS13CQ709C8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms