Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RIPPLY3P57055 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RIPPLY3P57055 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 NORAD-201ENST00000565493 5339 ntBASIC12.82□□□□□ -0.36
RIPPLY3P57055 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 CTSL-202ENST00000342020 933 ntTSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 CD8B2-202ENST00000417670 633 ntBASIC12.82□□□□□ -0.36
RIPPLY3P57055 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 AC103810.10-201ENST00000606504 343 ntBASIC12.82□□□□□ -0.36
RIPPLY3P57055 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 AC051619.9-201ENST00000623237 597 ntBASIC12.82□□□□□ -0.36
RIPPLY3P57055 BX539320.1-201ENST00000623759 877 ntBASIC12.82□□□□□ -0.36
RIPPLY3P57055 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 AC006453.4-201ENST00000636949 1252 ntBASIC12.82□□□□□ -0.36
RIPPLY3P57055 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RIPPLY3P57055 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RIPPLY3P57055 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RIPPLY3P57055 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.81□□□□□ -0.36
RIPPLY3P57055 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RIPPLY3P57055 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.81□□□□□ -0.36
RIPPLY3P57055 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.81□□□□□ -0.36
RIPPLY3P57055 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.81□□□□□ -0.36
RIPPLY3P57055 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.81□□□□□ -0.36
RIPPLY3P57055 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.81□□□□□ -0.36
RIPPLY3P57055 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RIPPLY3P57055 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 NHP2-202ENST00000314397 599 ntTSL 2 BASIC12.81□□□□□ -0.36
RIPPLY3P57055 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RIPPLY3P57055 AC023141.7-201ENST00000430646 407 ntBASIC12.81□□□□□ -0.36
RIPPLY3P57055 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.81□□□□□ -0.36
RIPPLY3P57055 AL139010.1-201ENST00000454878 894 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms