Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.6□□□□□ -0.07
PTPN6P29350 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
PTPN6P29350 AL033527.5-202ENST00000641632 1098 ntBASIC14.6□□□□□ -0.07
PTPN6P29350 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.6□□□□□ -0.07
PTPN6P29350 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
PTPN6P29350 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.6□□□□□ -0.07
PTPN6P29350 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.6□□□□□ -0.07
PTPN6P29350 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PTPN6P29350 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PTPN6P29350 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.6□□□□□ -0.07
PTPN6P29350 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTPN6P29350 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.6□□□□□ -0.07
PTPN6P29350 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PTPN6P29350 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PTPN6P29350 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.59□□□□□ -0.07
PTPN6P29350 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PTPN6P29350 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN6P29350 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.59□□□□□ -0.07
PTPN6P29350 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN6P29350 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.59□□□□□ -0.07
PTPN6P29350 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.59□□□□□ -0.07
PTPN6P29350 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN6P29350 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 AC010336.2-201ENST00000564226 506 ntBASIC14.59□□□□□ -0.07
PTPN6P29350 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.59□□□□□ -0.07
PTPN6P29350 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.59□□□□□ -0.07
PTPN6P29350 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 AC025181.2-201ENST00000606994 802 ntBASIC14.59□□□□□ -0.07
PTPN6P29350 AF228730.6-201ENST00000641497 218 ntBASIC14.59□□□□□ -0.07
PTPN6P29350 AC084121.3-201ENST00000641716 218 ntBASIC14.59□□□□□ -0.07
PTPN6P29350 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.59□□□□□ -0.07
PTPN6P29350 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PTPN6P29350 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.59□□□□□ -0.07
PTPN6P29350 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.59□□□□□ -0.07
PTPN6P29350 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.59□□□□□ -0.07
PTPN6P29350 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.59□□□□□ -0.07
PTPN6P29350 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTPN6P29350 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTPN6P29350 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.07
PTPN6P29350 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PTPN6P29350 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.58□□□□□ -0.07
PTPN6P29350 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTPN6P29350 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PTPN6P29350 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTPN6P29350 AC018529.2-202ENST00000611482 3087 ntBASIC14.58□□□□□ -0.07
PTPN6P29350 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.58□□□□□ -0.08
PTPN6P29350 AC012508.2-201ENST00000567613 1472 ntBASIC14.58□□□□□ -0.08
PTPN6P29350 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.58□□□□□ -0.08
PTPN6P29350 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.58□□□□□ -0.08
PTPN6P29350 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.58□□□□□ -0.08
PTPN6P29350 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
PTPN6P29350 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.58□□□□□ -0.08
PTPN6P29350 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.58□□□□□ -0.08
PTPN6P29350 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.58□□□□□ -0.08
PTPN6P29350 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.58□□□□□ -0.08
PTPN6P29350 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.58□□□□□ -0.08
PTPN6P29350 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.58□□□□□ -0.08
PTPN6P29350 AC015922.1-201ENST00000421102 1152 ntBASIC14.58□□□□□ -0.08
PTPN6P29350 TSPY16P-201ENST00000449843 468 ntBASIC14.58□□□□□ -0.08
PTPN6P29350 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.58□□□□□ -0.08
PTPN6P29350 ZNF890P-202ENST00000530367 1156 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms