Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A1P27658 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A1P27658 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A1P27658 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.4□□□□□ -0.26
COL8A1P27658 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A1P27658 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
COL8A1P27658 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A1P27658 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A1P27658 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A1P27658 AC026316.1-201ENST00000398900 414 ntBASIC13.4□□□□□ -0.26
COL8A1P27658 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.4□□□□□ -0.26
COL8A1P27658 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A1P27658 AC136604.1-201ENST00000418535 575 ntBASIC13.4□□□□□ -0.26
COL8A1P27658 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
COL8A1P27658 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A1P27658 AC100850.1-201ENST00000506768 649 ntBASIC13.4□□□□□ -0.26
COL8A1P27658 AC116345.2-201ENST00000512837 523 ntBASIC13.4□□□□□ -0.26
COL8A1P27658 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A1P27658 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
COL8A1P27658 AC103988.2-201ENST00000561804 725 ntBASIC13.4□□□□□ -0.26
COL8A1P27658 AL450472.2-201ENST00000603663 1156 ntBASIC13.4□□□□□ -0.26
COL8A1P27658 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.4□□□□□ -0.26
COL8A1P27658 AL136301.1-201ENST00000615830 422 ntBASIC13.4□□□□□ -0.26
COL8A1P27658 AC022748.3-201ENST00000621828 275 ntBASIC13.4□□□□□ -0.26
COL8A1P27658 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A1P27658 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
COL8A1P27658 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A1P27658 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A1P27658 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.4□□□□□ -0.26
COL8A1P27658 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A1P27658 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
COL8A1P27658 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COL8A1P27658 AC148477.4-201ENST00000613430 1793 ntBASIC13.4□□□□□ -0.26
COL8A1P27658 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
COL8A1P27658 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
COL8A1P27658 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 ACTBP8-201ENST00000403258 1108 ntBASIC13.39□□□□□ -0.27
COL8A1P27658 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.39□□□□□ -0.27
COL8A1P27658 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.39□□□□□ -0.27
COL8A1P27658 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC13.39□□□□□ -0.27
COL8A1P27658 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.39□□□□□ -0.27
COL8A1P27658 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 AC013355.1-201ENST00000562625 723 ntBASIC13.39□□□□□ -0.27
COL8A1P27658 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.39□□□□□ -0.27
COL8A1P27658 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.39□□□□□ -0.27
COL8A1P27658 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 RN7SL48P-201ENST00000579283 293 ntBASIC13.39□□□□□ -0.27
COL8A1P27658 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.39□□□□□ -0.27
COL8A1P27658 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 DOC2GP-204ENST00000639052 2548 ntBASIC13.39□□□□□ -0.27
COL8A1P27658 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
COL8A1P27658 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
COL8A1P27658 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.39□□□□□ -0.27
COL8A1P27658 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
COL8A1P27658 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms