Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 AC097376.2-205ENST00000610159 5334 ntBASIC14.32□□□□□ -0.12
TNFRSF1BP20333 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 BX640514.1-201ENST00000583223 1918 ntBASIC14.32□□□□□ -0.12
TNFRSF1BP20333 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 AC104581.4-201ENST00000623126 3052 ntBASIC14.32□□□□□ -0.12
TNFRSF1BP20333 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TNFRSF1BP20333 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 AP001267.2-201ENST00000532619 2086 ntBASIC14.31□□□□□ -0.12
TNFRSF1BP20333 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 YBX1P5-201ENST00000509441 847 ntBASIC14.31□□□□□ -0.12
TNFRSF1BP20333 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 AC011467.4-201ENST00000594891 528 ntBASIC14.31□□□□□ -0.12
TNFRSF1BP20333 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 AL589739.1-201ENST00000607720 493 ntBASIC14.31□□□□□ -0.12
TNFRSF1BP20333 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.31□□□□□ -0.12
TNFRSF1BP20333 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TNFRSF1BP20333 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 239.3 ms