Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNF40O75150 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF40O75150 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNF40O75150 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF40O75150 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RNF40O75150 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.7■□□□□ 0.26
RNF40O75150 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF40O75150 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 AL080243.2-201ENST00000418783 582 ntBASIC16.7■□□□□ 0.26
RNF40O75150 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF40O75150 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF40O75150 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF40O75150 AC135586.1-201ENST00000539323 574 ntBASIC16.7■□□□□ 0.26
RNF40O75150 AL079307.3-201ENST00000556114 283 ntBASIC16.7■□□□□ 0.26
RNF40O75150 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.7■□□□□ 0.26
RNF40O75150 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.7■□□□□ 0.26
RNF40O75150 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF40O75150 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF40O75150 AL133215.2-201ENST00000609242 977 ntBASIC16.7■□□□□ 0.26
RNF40O75150 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF40O75150 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RNF40O75150 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF40O75150 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF40O75150 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF40O75150 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RNF40O75150 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF40O75150 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RNF40O75150 AL592424.1-201ENST00000563624 1536 ntBASIC16.7■□□□□ 0.26
RNF40O75150 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF40O75150 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF40O75150 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 FGD5P1-202ENST00000614866 2498 ntBASIC16.69■□□□□ 0.26
RNF40O75150 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF40O75150 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RNF40O75150 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RNF40O75150 AL353779.1-201ENST00000434793 351 ntBASIC16.69■□□□□ 0.26
RNF40O75150 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF40O75150 GNAQP1-201ENST00000444815 1067 ntBASIC16.69■□□□□ 0.26
RNF40O75150 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF40O75150 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF40O75150 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF40O75150 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF40O75150 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
RNF40O75150 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF40O75150 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 AC138969.3-201ENST00000546612 1459 ntBASIC16.68■□□□□ 0.26
RNF40O75150 AC138932.2-201ENST00000548268 1459 ntBASIC16.68■□□□□ 0.26
RNF40O75150 AC126755.4-201ENST00000549796 1459 ntBASIC16.68■□□□□ 0.26
RNF40O75150 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RNF40O75150 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF40O75150 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF40O75150 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF40O75150 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RNF40O75150 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
RNF40O75150 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF40O75150 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF40O75150 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RNF40O75150 AC104794.3-201ENST00000566840 1248 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms