Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 AL133267.1-201ENST00000398220 340 ntBASIC15.26■□□□□ 0.03
PCDHGA12O60330 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 AC015910.1-201ENST00000579400 975 ntBASIC15.26■□□□□ 0.03
PCDHGA12O60330 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 AL022328.3-201ENST00000607943 679 ntBASIC15.26■□□□□ 0.03
PCDHGA12O60330 AP005019.2-201ENST00000615104 511 ntBASIC15.26■□□□□ 0.03
PCDHGA12O60330 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHGA12O60330 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
PCDHGA12O60330 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 AC004945.1-201ENST00000416738 983 ntBASIC15.25■□□□□ 0.03
PCDHGA12O60330 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 Z93015.1-201ENST00000451718 390 ntBASIC15.25■□□□□ 0.03
PCDHGA12O60330 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 KRT18P25-201ENST00000508931 1278 ntBASIC15.25■□□□□ 0.03
PCDHGA12O60330 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 AP001258.2-201ENST00000529891 490 ntBASIC15.25■□□□□ 0.03
PCDHGA12O60330 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 AL118558.3-201ENST00000607414 1079 ntBASIC15.25■□□□□ 0.03
PCDHGA12O60330 AC107373.2-201ENST00000607735 490 ntBASIC15.25■□□□□ 0.03
PCDHGA12O60330 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 AC132938.4-201ENST00000623835 848 ntBASIC15.25■□□□□ 0.03
PCDHGA12O60330 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCDHGA12O60330 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHGA12O60330 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHGA12O60330 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
PCDHGA12O60330 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms