Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
PAX4O43316 FP325330.2-201ENST00000624219 5630 ntBASIC11.07□□□□□ -0.64
PAX4O43316 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.07□□□□□ -0.64
PAX4O43316 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC11.07□□□□□ -0.64
PAX4O43316 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
PAX4O43316 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
PAX4O43316 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.07□□□□□ -0.64
PAX4O43316 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.07□□□□□ -0.64
PAX4O43316 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
PAX4O43316 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.07□□□□□ -0.64
PAX4O43316 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.07□□□□□ -0.64
PAX4O43316 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.07□□□□□ -0.64
PAX4O43316 CYMP-203ENST00000474680 1263 ntBASIC11.07□□□□□ -0.64
PAX4O43316 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.07□□□□□ -0.64
PAX4O43316 SLED1-202ENST00000512051 380 ntBASIC11.07□□□□□ -0.64
PAX4O43316 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.07□□□□□ -0.64
PAX4O43316 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.07□□□□□ -0.64
PAX4O43316 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.07□□□□□ -0.64
PAX4O43316 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.07□□□□□ -0.64
PAX4O43316 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.07□□□□□ -0.64
PAX4O43316 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 AC025048.3-201ENST00000590609 569 ntBASIC11.07□□□□□ -0.64
PAX4O43316 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 AC005702.4-201ENST00000618393 416 ntBASIC11.07□□□□□ -0.64
PAX4O43316 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC11.07□□□□□ -0.64
PAX4O43316 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
PAX4O43316 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
PAX4O43316 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
PAX4O43316 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.07□□□□□ -0.64
PAX4O43316 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.07□□□□□ -0.64
PAX4O43316 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.06□□□□□ -0.64
PAX4O43316 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
PAX4O43316 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.06□□□□□ -0.64
PAX4O43316 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.06□□□□□ -0.64
PAX4O43316 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
PAX4O43316 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.06□□□□□ -0.64
PAX4O43316 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
PAX4O43316 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.06□□□□□ -0.64
PAX4O43316 AC104629.1-201ENST00000494226 508 ntBASIC11.06□□□□□ -0.64
PAX4O43316 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.06□□□□□ -0.64
PAX4O43316 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.06□□□□□ -0.64
PAX4O43316 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 AC044860.1-202ENST00000559481 777 ntBASIC11.06□□□□□ -0.64
PAX4O43316 AC027796.2-201ENST00000575326 344 ntBASIC11.06□□□□□ -0.64
PAX4O43316 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.06□□□□□ -0.64
PAX4O43316 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.06□□□□□ -0.64
PAX4O43316 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms