Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3B1O00203 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
AP3B1O00203 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.56■□□□□ 0.08
AP3B1O00203 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3B1O00203 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.56■□□□□ 0.08
AP3B1O00203 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.56■□□□□ 0.08
AP3B1O00203 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.56■□□□□ 0.08
AP3B1O00203 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.56■□□□□ 0.08
AP3B1O00203 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.56■□□□□ 0.08
AP3B1O00203 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
AP3B1O00203 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.56■□□□□ 0.08
AP3B1O00203 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.56■□□□□ 0.08
AP3B1O00203 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3B1O00203 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.56■□□□□ 0.08
AP3B1O00203 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3B1O00203 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3B1O00203 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
AP3B1O00203 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 AC007787.1-201ENST00000588095 1583 ntBASIC15.56■□□□□ 0.08
AP3B1O00203 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3B1O00203 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
AP3B1O00203 CICP24-201ENST00000605464 2705 ntBASIC15.56■□□□□ 0.08
AP3B1O00203 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
AP3B1O00203 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
AP3B1O00203 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3B1O00203 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP3B1O00203 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3B1O00203 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.55■□□□□ 0.08
AP3B1O00203 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3B1O00203 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3B1O00203 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3B1O00203 KRT18P28-201ENST00000453838 1332 ntBASIC15.55■□□□□ 0.08
AP3B1O00203 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.55■□□□□ 0.08
AP3B1O00203 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 AL645937.2-201ENST00000396808 931 ntBASIC15.55■□□□□ 0.08
AP3B1O00203 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.55■□□□□ 0.08
AP3B1O00203 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.55■□□□□ 0.08
AP3B1O00203 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.55■□□□□ 0.08
AP3B1O00203 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.55■□□□□ 0.08
AP3B1O00203 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
AP3B1O00203 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
AP3B1O00203 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
AP3B1O00203 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.55■□□□□ 0.08
AP3B1O00203 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.55■□□□□ 0.08
AP3B1O00203 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.55■□□□□ 0.08
AP3B1O00203 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.55■□□□□ 0.08
AP3B1O00203 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP3B1O00203 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3B1O00203 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3B1O00203 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3B1O00203 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.55■□□□□ 0.08
AP3B1O00203 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.55■□□□□ 0.08
AP3B1O00203 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.55■□□□□ 0.08
AP3B1O00203 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
AP3B1O00203 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3B1O00203 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.54■□□□□ 0.08
AP3B1O00203 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3B1O00203 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3B1O00203 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms