Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 DNAJB1P1-201ENST00000429417 1024 ntBASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 AC078875.1-201ENST00000431907 724 ntBASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 RN7SL8P-201ENST00000461771 266 ntBASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LOC102724428A0A0B4J2F2 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 RN7SL258P-201ENST00000478664 300 ntBASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC103810.10-201ENST00000606504 343 ntBASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 KRT8P21-201ENST00000430398 1491 ntBASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LOC102724428A0A0B4J2F2 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 LINC02199-201ENST00000506655 2702 ntBASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.19■□□□□ 0.66
LOC102724428A0A0B4J2F2 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms