Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 KLF2P2-201ENST00000416807 1039 ntBASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 COX5BP8-201ENST00000416911 349 ntBASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 INE1-201ENST00000456273 945 ntBASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 AC009486.1-201ENST00000569860 813 ntBASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 MIR5189-201ENST00000577370 114 ntBASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 CU639417.3-201ENST00000624240 1404 ntBASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 LILRP1-201ENST00000444199 1370 ntBASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHA4Q9UN74 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 KRT8P14-201ENST00000414254 1442 ntBASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 NME2P1-201ENST00000426182 414 ntBASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 AC022137.2-201ENST00000503482 481 ntBASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 MSTO2P-201ENST00000314835 1709 ntBASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHA4Q9UN74 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 AL512384.1-201ENST00000406683 331 ntBASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PCDHA4Q9UN74 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms