Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 AC099336.1-201ENST00000417053 1171 ntBASIC14.13□□□□□ -0.15
LRFN1Q9P244 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 FAM21FP-201ENST00000426241 1131 ntBASIC14.13□□□□□ -0.15
LRFN1Q9P244 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 AC004066.1-201ENST00000502488 802 ntBASIC14.13□□□□□ -0.15
LRFN1Q9P244 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 AC022188.1-201ENST00000620960 1664 ntBASIC14.13□□□□□ -0.15
LRFN1Q9P244 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 AC114812.1-204ENST00000449669 728 ntBASIC14.12□□□□□ -0.15
LRFN1Q9P244 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 KRT90P-201ENST00000549264 1064 ntBASIC14.12□□□□□ -0.15
LRFN1Q9P244 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 GNRHR2-203ENST00000581100 1187 ntBASIC14.12□□□□□ -0.15
LRFN1Q9P244 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 AC145423.3-201ENST00000615987 467 ntBASIC14.12□□□□□ -0.15
LRFN1Q9P244 RHOXF1P1-202ENST00000635473 501 ntBASIC14.12□□□□□ -0.15
LRFN1Q9P244 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 AL161772.1-201ENST00000610494 4412 ntBASIC14.12□□□□□ -0.15
LRFN1Q9P244 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LRFN1Q9P244 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 LINC00554-201ENST00000564841 3011 ntBASIC14.12□□□□□ -0.15
LRFN1Q9P244 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRFN1Q9P244 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms