Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 CNN2P8-201ENST00000421872 913 ntBASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.65■□□□□ 0.58
HMG20BQ9P0W2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
HMG20BQ9P0W2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMG20BQ9P0W2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
HMG20BQ9P0W2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.64■□□□□ 0.58
HMG20BQ9P0W2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMG20BQ9P0W2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 AL139094.1-201ENST00000405549 1188 ntBASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 NUS1P3-201ENST00000423502 862 ntBASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 CSF2RBP1-201ENST00000447905 391 ntBASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMG20BQ9P0W2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 HLA-V-201ENST00000429037 534 ntBASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 AC026954.1-201ENST00000429771 1293 ntBASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 AL033527.4-201ENST00000641026 673 ntBASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 LINC00554-201ENST00000564841 3011 ntBASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMG20BQ9P0W2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMG20BQ9P0W2 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 327.7 ms