Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 AC022532.1-201ENST00000624563 1728 ntBASIC15.23■□□□□ 0.03
SCAMP4Q969E2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 GK-202ENST00000378941 458 ntTSL 3 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 AC005229.1-201ENST00000392885 409 ntBASIC15.23■□□□□ 0.03
SCAMP4Q969E2 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.23■□□□□ 0.03
SCAMP4Q969E2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 AL355864.2-201ENST00000447420 863 ntBASIC15.23■□□□□ 0.03
SCAMP4Q969E2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 RAB43P1-201ENST00000561790 589 ntBASIC15.23■□□□□ 0.03
SCAMP4Q969E2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 AL022328.1-201ENST00000610050 478 ntBASIC15.23■□□□□ 0.03
SCAMP4Q969E2 PRSS30P-206ENST00000641773 873 ntBASIC15.23■□□□□ 0.03
SCAMP4Q969E2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 NORAD-201ENST00000565493 5339 ntBASIC15.23■□□□□ 0.03
SCAMP4Q969E2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCAMP4Q969E2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 KRT8P35-201ENST00000483942 1338 ntBASIC15.22■□□□□ 0.03
SCAMP4Q969E2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.22■□□□□ 0.03
SCAMP4Q969E2 NUS1P3-201ENST00000423502 862 ntBASIC15.22■□□□□ 0.03
SCAMP4Q969E2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 AC114812.1-204ENST00000449669 728 ntBASIC15.22■□□□□ 0.03
SCAMP4Q969E2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 GPR53P-205ENST00000457298 1084 ntBASIC15.22■□□□□ 0.03
SCAMP4Q969E2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 KRT18P25-201ENST00000508931 1278 ntBASIC15.22■□□□□ 0.03
SCAMP4Q969E2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 AL512343.1-201ENST00000605837 169 ntBASIC15.22■□□□□ 0.03
SCAMP4Q969E2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.22■□□□□ 0.03
SCAMP4Q969E2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.22■□□□□ 0.03
SCAMP4Q969E2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms