Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 AC069262.1-201ENST00000539058 672 ntBASIC13.86□□□□□ -0.19
PTP4A1Q93096 AL079307.3-201ENST00000556114 283 ntBASIC13.86□□□□□ -0.19
PTP4A1Q93096 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTP4A1Q93096 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PTP4A1Q93096 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 MTND6P24-201ENST00000440466 518 ntBASIC13.85□□□□□ -0.19
PTP4A1Q93096 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 MIR4453-201ENST00000584019 89 ntBASIC13.85□□□□□ -0.19
PTP4A1Q93096 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTP4A1Q93096 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
PTP4A1Q93096 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PTP4A1Q93096 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms