Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 HNRNPA1P2-207ENST00000432375 960 ntBASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 ACY3-202ENST00000529256 933 ntTSL 3 BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 MIR4640-201ENST00000581824 90 ntBASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 SLC25A24-204ENST00000569674 2357 ntBASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 AC006449.6-201ENST00000612330 2296 ntBASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.46■□□□□ 0.87
LTBP4Q8N2S1 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC20.45■□□□□ 0.87
LTBP4Q8N2S1 OR8T1P-201ENST00000421347 918 ntBASIC20.45■□□□□ 0.87
LTBP4Q8N2S1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.87
LTBP4Q8N2S1 ALG1L15P-201ENST00000482834 794 ntBASIC20.45■□□□□ 0.87
LTBP4Q8N2S1 GCOM2-201ENST00000509133 1104 ntBASIC20.45■□□□□ 0.87
LTBP4Q8N2S1 AC079331.1-201ENST00000623200 1200 ntBASIC20.45■□□□□ 0.87
LTBP4Q8N2S1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 TLE1P1-201ENST00000422965 589 ntBASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 RN7SL128P-201ENST00000467883 305 ntBASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 OR3A1-202ENST00000615105 966 ntBASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LTBP4Q8N2S1 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 STK24P1-201ENST00000455035 1291 ntBASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 MYL6-215ENST00000549566 685 ntTSL 2 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 KRT8P2-201ENST00000556193 944 ntBASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 AC005746.3-201ENST00000614751 393 ntBASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.44■□□□□ 0.86
LTBP4Q8N2S1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 JTB-202ENST00000356648 1040 ntTSL 2 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 ASS1P2-201ENST00000439895 1223 ntBASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 RN7SL578P-201ENST00000477781 283 ntBASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 HINT1-205ENST00000508488 703 ntTSL 2 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 AC004801.1-201ENST00000549557 360 ntBASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 HNRNPA1P5-201ENST00000558213 966 ntBASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 BMF-206ENST00000558774 671 ntTSL 3 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC20.43■□□□□ 0.86
LTBP4Q8N2S1 AC245369.7-201ENST00000631386 350 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms