Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC004945.1-201ENST00000416738 983 ntBASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 AC025062.2-201ENST00000605477 670 ntBASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 AC092119.3-201ENST00000612618 583 ntBASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.56□□□□□ -0.24
LYSMD2Q8IV50 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 HMGA1P7-201ENST00000406908 502 ntBASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 TPT1P11-201ENST00000458482 498 ntBASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 MIR4321-201ENST00000592276 80 ntBASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 AC006557.2-201ENST00000592985 1240 ntBASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.55□□□□□ -0.24
LYSMD2Q8IV50 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 BNIP3P1-202ENST00000550043 1585 ntBASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 AP000845.1-201ENST00000581677 2131 ntBASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 AC073621.1-201ENST00000392730 636 ntBASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 PMS2P4-201ENST00000412466 1052 ntBASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 FOSL1P1-201ENST00000511041 816 ntBASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 AC008667.4-201ENST00000607370 168 ntBASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
LYSMD2Q8IV50 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms