Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 LINC01230-201ENST00000625222 3017 ntBASIC15.27■□□□□ 0.04
HPS6Q86YV9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 AC148477.4-201ENST00000613430 1793 ntBASIC15.27■□□□□ 0.04
HPS6Q86YV9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 HLA-H-201ENST00000383620 1096 ntBASIC15.27■□□□□ 0.04
HPS6Q86YV9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 AC142381.1-201ENST00000426099 345 ntBASIC15.27■□□□□ 0.04
HPS6Q86YV9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 AC093724.1-201ENST00000448659 1027 ntBASIC15.27■□□□□ 0.04
HPS6Q86YV9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.27■□□□□ 0.04
HPS6Q86YV9 AL662799.1-202ENST00000614205 422 ntBASIC15.27■□□□□ 0.04
HPS6Q86YV9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HPS6Q86YV9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.27■□□□□ 0.03
HPS6Q86YV9 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.27■□□□□ 0.03
HPS6Q86YV9 MYO15B-237ENST00000642007 4893 ntBASIC15.27■□□□□ 0.03
HPS6Q86YV9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HPS6Q86YV9 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HPS6Q86YV9 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HPS6Q86YV9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.27■□□□□ 0.03
HPS6Q86YV9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HPS6Q86YV9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HPS6Q86YV9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.27■□□□□ 0.03
HPS6Q86YV9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.27■□□□□ 0.03
HPS6Q86YV9 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HPS6Q86YV9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
HPS6Q86YV9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HPS6Q86YV9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HPS6Q86YV9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
HPS6Q86YV9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HPS6Q86YV9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 AL353705.2-201ENST00000428243 662 ntBASIC15.26■□□□□ 0.03
HPS6Q86YV9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 SERBP1P5-201ENST00000510079 1181 ntBASIC15.26■□□□□ 0.03
HPS6Q86YV9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 AC025048.6-201ENST00000634326 1161 ntBASIC15.26■□□□□ 0.03
HPS6Q86YV9 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 AP001282.1-201ENST00000531301 1499 ntBASIC15.26■□□□□ 0.03
HPS6Q86YV9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
HPS6Q86YV9 AC079781.5-202ENST00000641784 3743 ntBASIC15.26■□□□□ 0.03
HPS6Q86YV9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HPS6Q86YV9 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HPS6Q86YV9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HPS6Q86YV9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HPS6Q86YV9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms