Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS1BP61024 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC10.9□□□□□ -0.66
CKS1BP61024 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC10.9□□□□□ -0.66
CKS1BP61024 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
CKS1BP61024 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 ARMC10P1-201ENST00000313754 855 ntBASIC10.9□□□□□ -0.66
CKS1BP61024 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CKS1BP61024 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 RAB17-203ENST00000409576 466 ntTSL 3 BASIC10.9□□□□□ -0.66
CKS1BP61024 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 LAGE3P1-201ENST00000425356 484 ntBASIC10.9□□□□□ -0.66
CKS1BP61024 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS1BP61024 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS1BP61024 AL160237.2-201ENST00000556165 472 ntBASIC10.9□□□□□ -0.66
CKS1BP61024 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC10.9□□□□□ -0.66
CKS1BP61024 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC10.9□□□□□ -0.66
CKS1BP61024 AC021097.1-201ENST00000607902 574 ntBASIC10.9□□□□□ -0.66
CKS1BP61024 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC10.9□□□□□ -0.66
CKS1BP61024 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
CKS1BP61024 MIR1199-201ENST00000621445 119 ntBASIC10.9□□□□□ -0.66
CKS1BP61024 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC10.9□□□□□ -0.66
CKS1BP61024 PGM5P2-202ENST00000637225 1043 ntBASIC10.9□□□□□ -0.66
CKS1BP61024 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC10.9□□□□□ -0.66
CKS1BP61024 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS1BP61024 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC10.9□□□□□ -0.66
CKS1BP61024 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
CKS1BP61024 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
CKS1BP61024 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CKS1BP61024 WARS-232ENST00000556645 2508 ntTSL 5 BASIC10.9□□□□□ -0.67
CKS1BP61024 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CKS1BP61024 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC10.9□□□□□ -0.67
CKS1BP61024 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
CKS1BP61024 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
CKS1BP61024 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC10.9□□□□□ -0.67
CKS1BP61024 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CKS1BP61024 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
CKS1BP61024 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CKS1BP61024 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
CKS1BP61024 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CKS1BP61024 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CKS1BP61024 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS1BP61024 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CKS1BP61024 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS1BP61024 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CKS1BP61024 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
CKS1BP61024 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC10.89□□□□□ -0.67
CKS1BP61024 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CKS1BP61024 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS1BP61024 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.89□□□□□ -0.67
CKS1BP61024 AC083964.2-201ENST00000623988 2396 ntBASIC10.89□□□□□ -0.67
CKS1BP61024 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CKS1BP61024 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS1BP61024 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC10.89□□□□□ -0.67
CKS1BP61024 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC10.89□□□□□ -0.67
CKS1BP61024 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS1BP61024 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC10.89□□□□□ -0.67
CKS1BP61024 HIST2H3DP1-201ENST00000401004 416 ntBASIC10.89□□□□□ -0.67
CKS1BP61024 ELK2BP-201ENST00000415014 1224 ntBASIC10.89□□□□□ -0.67
CKS1BP61024 RPS15P9-201ENST00000494093 319 ntBASIC10.89□□□□□ -0.67
CKS1BP61024 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS1BP61024 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC10.89□□□□□ -0.67
CKS1BP61024 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
CKS1BP61024 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC10.89□□□□□ -0.67
CKS1BP61024 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC10.89□□□□□ -0.67
CKS1BP61024 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 METTL23-204ENST00000586752 904 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS1BP61024 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 AL358472.4-201ENST00000633140 710 ntBASIC10.89□□□□□ -0.67
CKS1BP61024 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CKS1BP61024 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CKS1BP61024 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS1BP61024 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms