Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLDN20P56880 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLDN20P56880 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN20P56880 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CLDN20P56880 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLDN20P56880 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN20P56880 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLDN20P56880 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.15□□□□□ -0.14
CLDN20P56880 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN20P56880 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 AC013726.1-201ENST00000563747 2285 ntBASIC14.15□□□□□ -0.14
CLDN20P56880 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 TOMM22P5-201ENST00000416399 439 ntBASIC14.15□□□□□ -0.14
CLDN20P56880 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN20P56880 MEP1AP4-201ENST00000423244 1087 ntBASIC14.15□□□□□ -0.14
CLDN20P56880 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLDN20P56880 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN20P56880 AL158212.4-201ENST00000624062 1286 ntBASIC14.15□□□□□ -0.14
CLDN20P56880 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN20P56880 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CLDN20P56880 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN20P56880 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN20P56880 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLDN20P56880 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN20P56880 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CLDN20P56880 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN20P56880 AC087481.3-201ENST00000602886 1894 ntBASIC14.14□□□□□ -0.15
CLDN20P56880 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CLDN20P56880 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN20P56880 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 AC041040.2-201ENST00000622926 2899 ntBASIC14.14□□□□□ -0.15
CLDN20P56880 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN20P56880 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 AL391825.1-201ENST00000457671 1364 ntBASIC14.14□□□□□ -0.15
CLDN20P56880 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN20P56880 AC092127.1-201ENST00000567093 3455 ntBASIC14.14□□□□□ -0.15
CLDN20P56880 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLDN20P56880 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN20P56880 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN20P56880 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN20P56880 AC087499.6-201ENST00000411576 835 ntBASIC14.14□□□□□ -0.15
CLDN20P56880 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN20P56880 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLDN20P56880 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN20P56880 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN20P56880 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN20P56880 RARRES2P5-201ENST00000564013 466 ntBASIC14.14□□□□□ -0.15
CLDN20P56880 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN20P56880 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.14□□□□□ -0.15
CLDN20P56880 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.14□□□□□ -0.15
CLDN20P56880 AC140912.1-201ENST00000577171 1054 ntBASIC14.14□□□□□ -0.15
CLDN20P56880 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.14□□□□□ -0.15
CLDN20P56880 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN20P56880 AL391069.4-201ENST00000609583 481 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms