Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 AC093525.8-201ENST00000624099 1342 ntBASIC11.44□□□□□ -0.58
CMC4P56277 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.44□□□□□ -0.58
CMC4P56277 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.44□□□□□ -0.58
CMC4P56277 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CMC4P56277 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CMC4P56277 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CMC4P56277 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 AL512384.1-201ENST00000406683 331 ntBASIC11.44□□□□□ -0.58
CMC4P56277 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
CMC4P56277 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 KRT43P-201ENST00000434019 910 ntBASIC11.44□□□□□ -0.58
CMC4P56277 AL355864.2-201ENST00000447420 863 ntBASIC11.44□□□□□ -0.58
CMC4P56277 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.44□□□□□ -0.58
CMC4P56277 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.44□□□□□ -0.58
CMC4P56277 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CMC4P56277 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CMC4P56277 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.44□□□□□ -0.58
CMC4P56277 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.44□□□□□ -0.58
CMC4P56277 AC007950.2-201ENST00000615045 2347 ntBASIC11.44□□□□□ -0.58
CMC4P56277 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CMC4P56277 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
CMC4P56277 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.44□□□□□ -0.58
CMC4P56277 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
CMC4P56277 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.44□□□□□ -0.58
CMC4P56277 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CMC4P56277 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CMC4P56277 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 KRT8P44-201ENST00000441609 1350 ntBASIC11.43□□□□□ -0.58
CMC4P56277 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
CMC4P56277 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.43□□□□□ -0.58
CMC4P56277 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.43□□□□□ -0.58
CMC4P56277 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.43□□□□□ -0.58
CMC4P56277 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
CMC4P56277 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CMC4P56277 AL035633.1-201ENST00000406139 838 ntBASIC11.43□□□□□ -0.58
CMC4P56277 BAATP1-201ENST00000412284 1225 ntBASIC11.43□□□□□ -0.58
CMC4P56277 AC098850.1-201ENST00000419919 790 ntBASIC11.43□□□□□ -0.58
CMC4P56277 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC11.43□□□□□ -0.58
CMC4P56277 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.43□□□□□ -0.58
CMC4P56277 AC022616.1-201ENST00000518688 554 ntBASIC11.43□□□□□ -0.58
CMC4P56277 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms