Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.29□□□□□ -0.28
HCFC1P51610 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 LINC02447-202ENST00000501888 2146 ntBASIC13.29□□□□□ -0.28
HCFC1P51610 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 MIR33B-201ENST00000385104 96 ntBASIC13.29□□□□□ -0.28
HCFC1P51610 PDIA3P2-201ENST00000428073 158 ntBASIC13.29□□□□□ -0.28
HCFC1P51610 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.29□□□□□ -0.28
HCFC1P51610 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.29□□□□□ -0.28
HCFC1P51610 NAT9-224ENST00000583757 583 ntTSL 3 BASIC13.29□□□□□ -0.28
HCFC1P51610 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.29□□□□□ -0.28
HCFC1P51610 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HCFC1P51610 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HCFC1P51610 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HCFC1P51610 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.28□□□□□ -0.28
HCFC1P51610 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 AC084364.1-201ENST00000551967 1556 ntBASIC13.28□□□□□ -0.28
HCFC1P51610 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HCFC1P51610 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 CLUHP2-201ENST00000426660 1303 ntBASIC13.28□□□□□ -0.28
HCFC1P51610 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HCFC1P51610 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
HCFC1P51610 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HCFC1P51610 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.28□□□□□ -0.28
HCFC1P51610 AC253536.4-201ENST00000440539 267 ntBASIC13.28□□□□□ -0.28
HCFC1P51610 LDHBP1-201ENST00000455730 1119 ntBASIC13.28□□□□□ -0.28
HCFC1P51610 MARK2P5-201ENST00000507649 634 ntBASIC13.28□□□□□ -0.28
HCFC1P51610 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.28□□□□□ -0.28
HCFC1P51610 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
HCFC1P51610 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.28□□□□□ -0.28
HCFC1P51610 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.28□□□□□ -0.28
HCFC1P51610 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 MIR6727-201ENST00000620702 65 ntBASIC13.28□□□□□ -0.28
HCFC1P51610 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.28□□□□□ -0.28
HCFC1P51610 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.28□□□□□ -0.28
HCFC1P51610 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.28□□□□□ -0.28
HCFC1P51610 AC069224.1-201ENST00000566372 1715 ntBASIC13.28□□□□□ -0.28
HCFC1P51610 OR6D1P-202ENST00000641007 5290 ntBASIC13.28□□□□□ -0.28
HCFC1P51610 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.28□□□□□ -0.28
HCFC1P51610 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HCFC1P51610 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.28□□□□□ -0.28
HCFC1P51610 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HCFC1P51610 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC13.28□□□□□ -0.28
HCFC1P51610 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.27□□□□□ -0.28
HCFC1P51610 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HCFC1P51610 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HCFC1P51610 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
HCFC1P51610 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HCFC1P51610 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HCFC1P51610 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
HCFC1P51610 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
HCFC1P51610 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.27□□□□□ -0.28
HCFC1P51610 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HCFC1P51610 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HCFC1P51610 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HCFC1P51610 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.27□□□□□ -0.28
HCFC1P51610 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.27□□□□□ -0.28
HCFC1P51610 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.27□□□□□ -0.28
HCFC1P51610 FTLP10-202ENST00000505798 471 ntBASIC13.27□□□□□ -0.28
HCFC1P51610 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HCFC1P51610 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HCFC1P51610 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.27□□□□□ -0.28
HCFC1P51610 AL603764.1-201ENST00000636452 321 ntBASIC13.27□□□□□ -0.28
HCFC1P51610 AC244452.3-201ENST00000636814 210 ntBASIC13.27□□□□□ -0.28
HCFC1P51610 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HCFC1P51610 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.27□□□□□ -0.29
HCFC1P51610 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.27□□□□□ -0.29
HCFC1P51610 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.27□□□□□ -0.29
HCFC1P51610 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
HCFC1P51610 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.27□□□□□ -0.29
HCFC1P51610 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HCFC1P51610 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.27□□□□□ -0.29
HCFC1P51610 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.27□□□□□ -0.29
HCFC1P51610 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms