Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PTPN1P18031 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.25■□□□□ 0.19
PTPN1P18031 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN1P18031 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.25■□□□□ 0.19
PTPN1P18031 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN1P18031 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN1P18031 AC145423.3-201ENST00000615987 467 ntBASIC16.25■□□□□ 0.19
PTPN1P18031 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN1P18031 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PTPN1P18031 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PTPN1P18031 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN1P18031 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PTPN1P18031 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN1P18031 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PTPN1P18031 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PTPN1P18031 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PTPN1P18031 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN1P18031 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN1P18031 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PTPN1P18031 AC023024.2-201ENST00000623561 1993 ntBASIC16.24■□□□□ 0.19
PTPN1P18031 AL136379.1-201ENST00000623471 2642 ntBASIC16.24■□□□□ 0.19
PTPN1P18031 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTPN1P18031 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN1P18031 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PTPN1P18031 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PTPN1P18031 ACTBP8-201ENST00000403258 1108 ntBASIC16.24■□□□□ 0.19
PTPN1P18031 MIR1909-201ENST00000411312 80 ntBASIC16.24■□□□□ 0.19
PTPN1P18031 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN1P18031 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.24■□□□□ 0.19
PTPN1P18031 AC007551.1-201ENST00000457394 519 ntBASIC16.24■□□□□ 0.19
PTPN1P18031 FTH1P14-201ENST00000482930 551 ntBASIC16.24■□□□□ 0.19
PTPN1P18031 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PTPN1P18031 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN1P18031 GNRHR2-203ENST00000581100 1187 ntBASIC16.24■□□□□ 0.19
PTPN1P18031 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN1P18031 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN1P18031 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 AC017083.2-201ENST00000608069 979 ntBASIC16.24■□□□□ 0.19
PTPN1P18031 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN1P18031 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTPN1P18031 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PTPN1P18031 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN1P18031 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
PTPN1P18031 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN1P18031 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PTPN1P18031 AC092384.3-202ENST00000564646 2873 ntBASIC16.24■□□□□ 0.19
PTPN1P18031 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.24■□□□□ 0.19
PTPN1P18031 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPN1P18031 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN1P18031 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PTPN1P18031 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PTPN1P18031 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PTPN1P18031 KRT8P14-201ENST00000414254 1442 ntBASIC16.23■□□□□ 0.19
PTPN1P18031 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PTPN1P18031 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PTPN1P18031 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PTPN1P18031 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPN1P18031 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 BOLA2P3-201ENST00000404566 256 ntBASIC16.23■□□□□ 0.19
PTPN1P18031 AC016694.1-201ENST00000434179 700 ntBASIC16.23■□□□□ 0.19
PTPN1P18031 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PTPN1P18031 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN1P18031 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPN1P18031 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPN1P18031 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PTPN1P18031 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms