Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.9■□□□□ 0.3
SMPD1P17405 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.9■□□□□ 0.3
SMPD1P17405 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.9■□□□□ 0.3
SMPD1P17405 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.9■□□□□ 0.3
SMPD1P17405 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.9■□□□□ 0.3
SMPD1P17405 TUBB8P8-201ENST00000458717 1058 ntBASIC16.9■□□□□ 0.3
SMPD1P17405 AC106794.1-201ENST00000506935 792 ntBASIC16.9■□□□□ 0.3
SMPD1P17405 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.9■□□□□ 0.3
SMPD1P17405 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.9■□□□□ 0.3
SMPD1P17405 FGFR3P5-201ENST00000564496 886 ntBASIC16.9■□□□□ 0.3
SMPD1P17405 AC005324.6-201ENST00000587972 613 ntBASIC16.9■□□□□ 0.3
SMPD1P17405 AC138696.2-201ENST00000607376 223 ntBASIC16.9■□□□□ 0.3
SMPD1P17405 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.9■□□□□ 0.3
SMPD1P17405 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.9■□□□□ 0.3
SMPD1P17405 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.9■□□□□ 0.3
SMPD1P17405 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.9■□□□□ 0.3
SMPD1P17405 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SMPD1P17405 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SMPD1P17405 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SMPD1P17405 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.9■□□□□ 0.3
SMPD1P17405 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SMPD1P17405 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
SMPD1P17405 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SMPD1P17405 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
SMPD1P17405 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SMPD1P17405 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 AL513523.2-202ENST00000427283 2040 ntBASIC16.89■□□□□ 0.29
SMPD1P17405 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SMPD1P17405 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.89■□□□□ 0.29
SMPD1P17405 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.89■□□□□ 0.29
SMPD1P17405 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SMPD1P17405 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SMPD1P17405 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.89■□□□□ 0.29
SMPD1P17405 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SMPD1P17405 HINT2P1-201ENST00000419438 481 ntBASIC16.89■□□□□ 0.29
SMPD1P17405 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.89■□□□□ 0.29
SMPD1P17405 AC011742.3-201ENST00000439053 820 ntBASIC16.89■□□□□ 0.29
SMPD1P17405 AC024681.1-201ENST00000521917 487 ntBASIC16.89■□□□□ 0.29
SMPD1P17405 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.89■□□□□ 0.29
SMPD1P17405 AC068587.8-201ENST00000641239 219 ntBASIC16.89■□□□□ 0.29
SMPD1P17405 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.89■□□□□ 0.29
SMPD1P17405 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 AC011840.2-201ENST00000563063 1520 ntBASIC16.89■□□□□ 0.29
SMPD1P17405 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.89■□□□□ 0.29
SMPD1P17405 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SMPD1P17405 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.89■□□□□ 0.29
SMPD1P17405 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.89■□□□□ 0.29
SMPD1P17405 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SMPD1P17405 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SMPD1P17405 E2F3P2-201ENST00000447755 1422 ntBASIC16.88■□□□□ 0.29
SMPD1P17405 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.88■□□□□ 0.29
SMPD1P17405 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.88■□□□□ 0.29
SMPD1P17405 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.88■□□□□ 0.29
SMPD1P17405 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.88■□□□□ 0.29
SMPD1P17405 AC134698.3-201ENST00000523880 214 ntBASIC16.88■□□□□ 0.29
SMPD1P17405 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.88■□□□□ 0.29
SMPD1P17405 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.88■□□□□ 0.29
SMPD1P17405 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.88■□□□□ 0.29
SMPD1P17405 AC100827.2-201ENST00000563214 1194 ntBASIC16.88■□□□□ 0.29
SMPD1P17405 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.88■□□□□ 0.29
SMPD1P17405 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.88■□□□□ 0.29
SMPD1P17405 AC100757.4-201ENST00000626934 759 ntBASIC16.88■□□□□ 0.29
SMPD1P17405 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.88■□□□□ 0.29
SMPD1P17405 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SMPD1P17405 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SMPD1P17405 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
SMPD1P17405 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.88■□□□□ 0.29
SMPD1P17405 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.88■□□□□ 0.29
SMPD1P17405 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms