Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 LINC00628-201ENST00000628516 1289 ntBASIC16.72■□□□□ 0.27
CCDC172P0C7W6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 AL645728.2-202ENST00000641679 227 ntBASIC16.72■□□□□ 0.27
CCDC172P0C7W6 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.72■□□□□ 0.27
CCDC172P0C7W6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC172P0C7W6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 AC015922.1-201ENST00000421102 1152 ntBASIC16.71■□□□□ 0.27
CCDC172P0C7W6 GHSR-202ENST00000427970 912 ntBASIC16.71■□□□□ 0.27
CCDC172P0C7W6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 HLA-J-203ENST00000494367 1087 ntBASIC16.71■□□□□ 0.27
CCDC172P0C7W6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 AC025048.3-201ENST00000590609 569 ntBASIC16.71■□□□□ 0.27
CCDC172P0C7W6 AC011467.4-201ENST00000594891 528 ntBASIC16.71■□□□□ 0.27
CCDC172P0C7W6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 AC005702.4-201ENST00000618393 416 ntBASIC16.71■□□□□ 0.27
CCDC172P0C7W6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC172P0C7W6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.71■□□□□ 0.26
CCDC172P0C7W6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC172P0C7W6 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.7■□□□□ 0.26
CCDC172P0C7W6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms