Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CPNE3O75131 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CPNE3O75131 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE3O75131 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
CPNE3O75131 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.86□□□□□ -0.03
CPNE3O75131 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE3O75131 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CPNE3O75131 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE3O75131 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.86□□□□□ -0.03
CPNE3O75131 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE3O75131 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE3O75131 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CPNE3O75131 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE3O75131 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.86□□□□□ -0.03
CPNE3O75131 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE3O75131 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.86□□□□□ -0.03
CPNE3O75131 RPSAP52-203ENST00000622976 1023 ntBASIC14.86□□□□□ -0.03
CPNE3O75131 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.86□□□□□ -0.03
CPNE3O75131 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE3O75131 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
CPNE3O75131 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
CPNE3O75131 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.86□□□□□ -0.03
CPNE3O75131 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CPNE3O75131 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.86□□□□□ -0.03
CPNE3O75131 AC018665.1-201ENST00000622927 1362 ntBASIC14.85□□□□□ -0.03
CPNE3O75131 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE3O75131 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CPNE3O75131 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.85□□□□□ -0.03
CPNE3O75131 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 AC018892.3-201ENST00000623986 2499 ntBASIC14.85□□□□□ -0.03
CPNE3O75131 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CPNE3O75131 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CPNE3O75131 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE3O75131 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CPNE3O75131 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CPNE3O75131 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE3O75131 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.85□□□□□ -0.03
CPNE3O75131 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.85□□□□□ -0.03
CPNE3O75131 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
CPNE3O75131 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE3O75131 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.85□□□□□ -0.03
CPNE3O75131 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.85□□□□□ -0.03
CPNE3O75131 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.85□□□□□ -0.03
CPNE3O75131 PTP4A1P2-201ENST00000546033 454 ntBASIC14.85□□□□□ -0.03
CPNE3O75131 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 AP005482.1-201ENST00000563722 1273 ntBASIC14.85□□□□□ -0.03
CPNE3O75131 AL022328.1-201ENST00000610050 478 ntBASIC14.85□□□□□ -0.03
CPNE3O75131 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
CPNE3O75131 AC133552.6-201ENST00000613406 534 ntBASIC14.85□□□□□ -0.03
CPNE3O75131 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.85□□□□□ -0.03
CPNE3O75131 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.85□□□□□ -0.03
CPNE3O75131 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 C8orf49-201ENST00000525043 1968 ntBASIC14.85□□□□□ -0.03
CPNE3O75131 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CPNE3O75131 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms